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Information for unigene UN44507

FASTA Sequence
Unigene ID: UN44507Length: 1207 SSR 
GGCTCTCTTAACCTCTCCTTCCCAGATCATCAGATCTCCACGTCAGCAAATCTCCGTCGCAAACCAGCCGGAGAAACCGAGAAACT
TTACCATCATGATTCCTTACGTAACGGTTTAGGAAGCTTCCTTCGCGCTCGGAAGAAACCTCACGTGGTTGGAGACAGTTTGGTTC
GATTACTCCGCCACAAAGTCCGACTACTATCTCTACTGCCACAACATTCTCTTCCTATTCCTCGTCTTTTCTCTAGCTCCTCTCCC
TCTGGTTCTCGTCGAGCTGGCTCGATCCGCTTCTGGGTGGTTCGACCGGTACAAGATCCAACCCAAAGTAAACTACTCCTTGTCCG
ACATGTTCGGATGTTACAAAGACGTCATGAAGATGTTCATCCTCGCCGTTGGTCCATTACAACTCGTTTCTTATCCTTCCATTCAG
ATGATTGGGATACGATCTGGTTCACCATTACCAACATTTTCAGAAATGCTGCCACAGTTGTTCGTCTACTTCTTGATAGAAGACTA
CACAAACTATTGGGTGCATAGATTTTTCCACAGTAAGTGGGGATACGAGAACATTCATCGCGTTCATCACGAGTACACAGCTCCTA
TTGGATACGCTGCACCTTATGCACACTGGGCTGAAGTGTTGCTTCTTGGAATCCCAACGTTTATGGGACCAGCGATTGCTCCTGGT
CACATGATAACCTTTTGGTTGTGGATAGCTTTAAGGCAAATTGGGGCTATAGAGAGCACAATATGATTTTCCATGGAGTCCAACAA
AATACATCCCTTTTTATGGTGGTGCTGAATACCATTACTACCATCACTACGTTGGAGGACAAAGCCACAGCAACCTCGCTTCAGTT
TTTACTTATTGTGACTACATTTATGGAACTGACAAGGGTTACCGATTCCAAAAGAAGCTTCTTGAGCAGGTCAAAGAGTCGTCCAA
GAAGAGCAACAAGCAGAACGGAGGTATCAATTCCGATTAGTAAATTAAAATATGGTCCTGATGAAGAAGTTATGTGTGGAGAAGAT
GTAGGCAAATCTACTCAGCTTCACGAAAGAAAAAGATAAGAAGAGTAGTAGTAGTAGTTGATATTTTTCTCGCATTTTATTTAGTT
TATGTTGTTTGTCATGGAGAAGGAATTGACATGTCATCAAAGCCGTGTTTGTTCTTATTAAAATGTATTTGATAAACACATTTGTT
CGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002872644 hypothetical protein ARALYDRAFT_911602 [Arabidopsis lyrata subsp. lyrata]10434e-111
CAB40952 putative C-4 sterol methyl oxidase [Arabidopsis thaliana]10362e-110
NP_192948 sterol-4alpha-methyl oxidase 1-1 [Arabidopsis thaliana]10362e-110
AAM64961 putative C-4 sterol methyl oxidase [Arabidopsis thaliana]10353e-110
AAQ13424 sterol-4-methyl-oxidase [Arabidopsis thaliana]10327e-110

Swiss-Prot top hits (Blast detail)Scoree value
Q55D54 Putative C-4 methylsterol oxidase DDB_G02697883012e-026
Q5ZLL6 C-4 methylsterol oxidase2223e-017
Q15800 C-4 methylsterol oxidase2081e-015
Q4R4Q4 C-4 methylsterol oxidase2081e-015
Q5R574 C-4 methylsterol oxidase2081e-015

TrEMBL top hits (Blast detail)Scoree value
Q8L7W5 AT4g12110/F16J13_18010362e-110
Q9SZ76 Putative C-4 sterol methyl oxidase10362e-110
Q8LB57 Putative C-4 sterol methyl oxidase10352e-110
Q71V05 Sterol-4-methyl-oxidase10325e-110
Q1EC69 At4g227569707e-103

Arabidopsis top hits (Blast detail)Scoree value
AT4G12110.1 SMO1-1 (STEROL-4ALPHA-METHYL OXIDASE 1-1); 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase/ C-4 methylsterol oxidase/ catalytic10369e-113
AT4G22756.1 SMO1-2 (STEROL C4-METHYL OXIDASE 1-2); 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase/ C-4 methylsterol oxidase/ catalytic9704e-105
AT4G22753.1 SMO1-3 (STEROL 4-ALPHA METHYL OXIDASE 1-3); 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase/ catalytic9151e-098
AT1G07420.1 SMO2-1 (STEROL 4-ALPHA-METHYL-OXIDASE 2-1); 4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase/ C-4 methylsterol oxidase3844e-037
AT2G29390.1 SMO2-2 (STEROL 4-ALPHA-METHYL-OXIDASE 2-2); 4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase/ C-4 methylsterol oxidase3664e-035

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

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