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Information for unigene UN44521
| FASTA Sequence |
| Unigene ID: UN44521 | Length: 1178 |
SSR | | GGACTCTCTCTTGTCTCTCTTTGACTTACATTCATCCAGAGTACTTATCCAACTCTCTAGTCCCCATTGCTTCTCAGCTATGTCGA
CATCCGAGAACAAAGTGGAAATCGTGGACAGAGGCCACAAGGAAGAGGAAAAAGAAGAAGGCAAAGACTTCATCCACGACAGCGAC
GTAGAACCCATTTTCTTTCATGAACCAACCGCGGACGTCCCCGCCATTACCATCCACAAGATCAACCTCGAGAGAGCAGACATCGT
CGTGTACGTCCGCGTCAATAACCCCAACATATTCCCCACCAATCCGATCGACATCCACTACCTCGTCGACGGGAGGAAACTCGTCT
CCGGAGAGATCCTCGGCGCAGGAACCATCGGGTCGTTCGAAGAAGAAATCTTCGAGATACCGTTGACTCTGAACTACGACGACATC
AAAAGCACTGATGACGACGTCAGCCCCGGGATATCGATGAACATACCTTACAGGGTCTACTTCACACTCTTTGTCTGCATCCCGAT
CTTTGGGAGTGCAACGTTACGGTTGGAGAATCGCGGTGAGATTCGGATACCTAAGAAGCCTGATGTCGAGATAGAGATGATCAAGC
TCCAGAAGTTTTCTCTGGAAGAGACCGTGGCGATCCTCCACGTGAGGTTTGAGAACATGAATGACTTCGACTTGGGGGTTAACGAC
TTGGACTGTGAGGTTTGGCTGTGTGATTCGAGCATTGGGGGAGCGGATATATCTTTCTCTATTAAGCTTGATAAGAACGGGAGTGG
TTTGGTTAACGTGCCGATCACGTTTAGGCTGCTGGATTTCTACGGGTCTGCGCTTTGGTATAAGATTCGTGGTAAAAGGATTGGGT
ATACTATTAAAGGTAATGTGGATGTTGATACGCCGTTTGGTGCTCTAAGGCTTCCAATTATCAAGGAAGGTGGTGAGACTCGTTTG
AAGAAGGAAGATGATGATGATGATGATGATGACGACGATGAGGAGTAAGAGAAGGAGCTCAAGAGAATGAGTGTGTGTTGAGTACT
GAATCTTCCATCTTTAAAAATAAAATAAAAATTTGAGGACTTGTTTGGTGTGTACTTTTGATGACTGATGGATCAGTCTTTTCAAT
AGTGCTCTCTTTTGTTCGGACTTCCTATATCAGTGTGGTCCGGTTCATTCGGTTATGTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_181934 Late embryogenesis abundant protein, group 2 [Arabidopsis thaliana] | 978 | 1e-103 |
| AAM64433 similar to late embryogenesis abundant proteins [Arabidopsis thaliana] | 976 | 2e-103 |
| XP_002880080 predicted protein [Arabidopsis lyrata subsp. lyrata] | 972 | 6e-103 |
| CBI24768 unnamed protein product [Vitis vinifera] | 835 | 5e-087 |
| CAN78553 hypothetical protein VITISV_042205 [Vitis vinifera] | 827 | 4e-086 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O80576 At2g44060 | 978 | 8e-104 |
| Q8LCW6 Similar to late embryogenesis abundant proteins | 976 | 1e-103 |
| A5B1L7 Putative uncharacterized protein | 827 | 3e-086 |
| B9T526 Late embryogenesis abundant protein Lea14-A, putative | 820 | 2e-085 |
| A9PFS2 Putative uncharacterized protein | 816 | 5e-085 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G44060.1 late embryogenesis abundant family protein / LEA family protein | 980 | 3e-106 |
| AT2G44060.2 late embryogenesis abundant family protein / LEA family protein | 980 | 3e-106 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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