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Information for unigene UN44528
| FASTA Sequence |
| Unigene ID: UN44528 | Length: 839 |
SSR | | GGAGGAAGCAACCGTTCCAACCAACGTCGAAGAGACGGTGACTGCACCGGTTGCGAGTGAGAAGAAAGCGAAGAAGACGAAGGAAG
CTAAAGCTCCGAAGAAGAAGCCTGCAGCGAAAGCTCCAAGGAAGAGATCTTCTTCTTCTCACCCAACCTACGAAGAGATGATTAAA
GACGCGATCACGACGTTGAAGGAGAGAACCGGATCTAGCCAATACGCGATTCGGAAGTTCATAGAGGAGAAGCAGAAGACGCTTCC
TCCAACGTTCAGGAAGCTTCTCCTCGTCAATCTCAAGAGACTCGTCGCTTCAGGGAAGCTCGTCAAAGTCAAAGGCTCCTTCAAGC
TCCCCTCCGCTACTAAATCAACCGCCGTTGCTGCTCCTGCTGCTCCTAAACCTAAACCGAAGACGAAGACAGTGGCTGCTGTGTCC
AAGACTAGAACTTCTCCAGGGAAGAAGAAGGCTGCTCCTCCTGCTAAGAAAGCCGCCGCGGCTGTAACTAAGAAGGCAAAGGCCAA
GGCTCCGGCTAAGAGCGTGAAGGCGAAGGCTGTAAAGTTTCCGGCGAAGAGGGTTTCAACAAGGAAGGTGAAGAAGTGAAAGAAGA
TTGGGGGTTTAGGGGGTAGTGAATTGGGGGAGATTGAATGAATGAATGAATGAATACATGTGTTGTAATGGTGGTTAGAGAGCTTC
TCTTAGGGGTAGTCTTTGTATAATTTGAATCATATCCTTTGAAGAAGCTTTTTGCTTTTTATCTTTGTTTCTGGTTTTTTCTTGAA
ACCACCCTTTTGTTCCTTGTTGTAATTTTTGTGTTTGTTTTGAAATTAAAGCTTCTTACATGGTG
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_001189643 histone H1.2 [Arabidopsis thaliana] | 488 | 5e-047 |
| XP_002892357 expressed protein [Arabidopsis lyrata subsp. lyrata] | 467 | 1e-044 |
| NP_180620 histone H1.2 [Arabidopsis thaliana] | 464 | 3e-044 |
| XP_002302069 histone H1 [Populus trichocarpa] | 454 | 4e-043 |
| NP_172161 histone H1.1 [Arabidopsis thaliana] | 453 | 5e-043 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G30620.1 histone H1.2 | 464 | 1e-046 |
| AT1G06760.1 histone H1, putative | 453 | 2e-045 |
| AT2G18050.1 HIS1-3 (HISTONE H1-3); DNA binding / nucleosomal DNA binding | 273 | 2e-024 |
| AT2G18050.2 HIS1-3 (HISTONE H1-3); DNA binding / nucleosomal DNA binding | 203 | 2e-016 |
| AT1G14900.1 HMGA (HIGH MOBILITY GROUP A); DNA binding | 154 | 1e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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