Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN44541

FASTA Sequence
Unigene ID: UN44541Length: 1018 SSR 
CTTAACATAGAGTTGACCAATTAAAGAAACACATAAACTTGAGACTACTAATTACATGGCAAAATCTTACTCAGTTTGAACAAGCC
AAGCGAGTGTCACTTTCCTCTAGCACTTAACTATAAAAACAAGCCAAGAATAAAGAACAAAGTAAAAAATATCACTGAAACATATC
AGCAATTGTGTTTCCTGAATCTGAAGAATCTCCACTCCCAAAATCCATCATCATCATCATCTTCAAATATTCATCCATATCACACT
CACATCCACACCATTGCTCTGCTTCAACAGAACTCCCTGCGCTTACGCTCGCACTCGCTCTTGCACTCACACTTGTACTTTCATTC
TCAACGTGAGAGGTAGATGAAGTGTAGTCCATAAACGGGAAGTTTAGTTTAGCCCGTGGCCCACGGAACCCAACAGCGGCTCGATC
ATAGGCCCTAGCCGCGTCCTCAGCTGTTTCAAAGGTGCCGAGCCAGACACGTACCGATCTCTTAGGATCTCTGATCTCAGCTGCAA
ACTTTCCCCAAGGTCTCTGCCTCACTCCTCTGTATCCATTCTTCTTGTTCTTCCTCTTCCTTATCTTCCCGCCTTCCGCTTTCTTC
GCCGCCGTCAAAGAGCCCTCTCTTCCACTACTATTACTAGTAACCCCATCTTCTTCTTCTACTTGTCTCTTTTCAATTCTCCGATT
TGGCGCGAAAAAGTAGTCGCAGCCCAGACAACCATCGATTCTACAAACTTGACAAGTGTCGGAATCGGACCGAGGCATTATCACTG
TGCTGTCGCTGGAGAAACCCAGATACGGCGTCGTTTCGCTTCCACCTGAGATGACGTGTTGCAAGGCGGCGACTATCACTGACAGT
TCTTGCTCCCGTGACAACTGCTCCTGATACGAATACCGGGTCTGGGTATCTGAAGCTCCGATGAATCCGGGTCTGGTGTAAGGATA
GTGCATGCCGGATTAAAATTTGAATTTGGATAAGAAAAGATTTGCTTCTTTGTGTTTTTTTGTTGTGTCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869148 hypothetical protein ARALYDRAFT_912950 [Arabidopsis lyrata subsp. lyrata]9752e-103
NP_195167 ethylene-responsive transcription factor ERF109 [Arabidopsis thaliana]9619e-102
BAG50061 transcription factor AP2-EREBP [Lotus japonicus]4116e-038
XP_002330325 AP2/ERF domain-containing transcription factor [Populus trichocarpa]3766e-034
XP_002460334 hypothetical protein SORBIDRAFT_02g026630 [Sorghum bicolor]3588e-032

Swiss-Prot top hits (Blast detail)Scoree value
Q9SZ06 Ethylene-responsive transcription factor ERF1099614e-103
Q9LW49 Ethylene-responsive transcription factor 42689e-023
P42736 Ethylene-responsive transcription factor RAP2-32643e-022
A0MES8 Ethylene-responsive transcription factor ABI42634e-022
O22259 Ethylene-responsive transcription factor ERF0712591e-021

TrEMBL top hits (Blast detail)Scoree value
B3IX34 Transcription factor AP2-EREBP4114e-038
D5L130 AP2 domain class transcription factor3792e-034
B9N4Y0 AP2/ERF domain-containing transcription factor3764e-034
C5X2B4 Putative uncharacterized protein Sb02g0266303585e-032
A2Z216 Putative uncharacterized protein3551e-031

Arabidopsis top hits (Blast detail)Scoree value
AT4G34410.1 RRTF1 ({REDOX RESPONSIVE TRANSCRIPTION FACTOR 1); DNA binding / transcription factor9623e-104
AT3G16770.1 ATEBP (ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN); DNA binding / protein binding / transcription activator/ transcription factor2642e-023
AT3G14230.3 RAP2.2; DNA binding / transcription factor2607e-023
AT2G47520.1 AP2 domain-containing transcription factor, putative2599e-023
AT5G50080.1 DNA binding / transcription factor2581e-022

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information