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Information for unigene UN44567

FASTA Sequence
Unigene ID: UN44567Length: 926 SSR 
GCACTCTTCTCCACAATGGAAACTTCATTTCCTGCTAAAACATTAAGTTCCTCAGATTCTTTGCTCTTTGAGCATTTTCGCTTCTT
AAACTCCTTCATAGGTTCAACGCTAGTAGTAGCCTGGAGGCCAAGGCTCTCAGCCTCTTGAACCGGCGAGAAGTTATTGCTGCTTT
CTTCGTTCTGCTTCTCTTCTCCTTTGGCTGTCTTCTTCTTCTTCTTCTTTCCACTCTTCTCCAAGACAGATGATTCATTCTTTAAT
TCATCAGATTTTGCGCTCCCTGAGTCATCTTTCTTCTTAGTAGACACCTCCGTAGTCTCAACCATGGTGGCATCTGGCACGGACTG
AGAAATGATCTTTCTTTTCTTCTTCTTCTTCCTCTTTTTCTTCTTTTCGTTAGATTTGGGGCTACTAGGGATATCACTTGTTGTCC
CAGTCTCCTCCTTGGTAATGGTGGTGAAGAAGACACCTCAAGATTGCAAGTATCTTCAAGCTCGACTTGTGTGGAATCAGAGGCAG
AGTCACTCTCATCACAGTCGGAACAGAACCAAGCCACGTAGCCATCTATAGGAACCGGTGTTATGCCACAACAATAGCGATGCACA
GCCGCCACTTTACAAGAGTCACAGAAAACGAGCGCTTCTACCCAACCTTCGTCCCCACATGTCTCACAAACATTCGCCATCTTTAC
TGCAAAAATTCAGACACTTACGCTGATCGAAAGAGGATTTAGGGTTTTGTGTTTAGTTGTCGTAACCGTTAGGTTGTGTAACTCGC
CGTGAGGGGGAAGTCGAAGAGAGTTCCGTTTTATGGAAAGCACAACTCAGATTTCACAGTCACTTTGTTCAAAATTTTGGTTCTGG
GTTGAACAATCGTAACTTTGCAATTTAGGGAGTACAACAGATATATATTTCCCAAGTGTTTATCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002891270 predicted protein [Arabidopsis lyrata subsp. lyrata]2403e-018
XP_002891271 predicted protein [Arabidopsis lyrata subsp. lyrata]2314e-017
NP_175045 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]2288e-017
AAF63102 Hypothetical protein [Arabidopsis thaliana]2288e-017
NP_001117432 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]2288e-017

Swiss-Prot top hits (Blast detail)Scoree value
Q9VB74 UPF0396 protein CG60661235e-006
P41891 Protein gar21227e-006

TrEMBL top hits (Blast detail)Scoree value
B3H578 Putative uncharacterized protein At1g437702285e-017
B6EUC7 Putative uncharacterized protein At1g43770.12285e-017
Q9MAS0 F28H19.3 protein2285e-017
B9SJG6 Putative uncharacterized protein1892e-012
C5LIE1 Putative uncharacterized protein1552e-008

Arabidopsis top hits (Blast detail)Scoree value
AT1G43770.1 PHD finger family protein2283e-019
AT1G43770.2 PHD finger family protein2283e-019
AT2G25670.1 unknown protein1163e-006
AT2G25670.2 unknown protein1163e-006
AT5G61120.1 INVOLVED IN: biological_process unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: nucleic acid binding (TAIR:AT5G61090.1); Has 77 Blast hits to 70 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 20; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).1145e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information