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Information for unigene UN44578
| FASTA Sequence |
| Unigene ID: UN44578 | Length: 871 |
SSR | | GGGAGAGAGAGAGACCGAACCTCATCTTATCATTCACTCTTCTCCGTTATCCTCTTCCTCTCTGAGCTCCCTCCAGCGACAATGGC
GTTATCGGTTTCAAACCTCGCCTCTTCACTCTTCTCTCTCTCTTTCTCTTCCCAGGTCTCTCAGGGACCAACCACCCTTTCCTTCC
CCCGAACGAACTCGGTGTTCTCACTACCGACGAAATCAGCTCGTCGCGCCTCTCTCTCAATCACCGCCACGGTGGAAGCTCCTCCC
GCGGAGGTAGCGGAGGATACGATGGAGCTGAAGAAGTACGTGAAATCTAGGCTTCCGGGAGGCTTCGCAGCTCAGAAAATCATAGG
CACTGGTCGGCGTAAGTGCGCCATCGCTCGTGTCGTTCTCCAAGAAGGCACCGGCAAAGTTATTATTAACTATCGCGATGCCAAGG
AGTACCTTCAGGGCAACCCACTGTGGCTTCAGTACGTTAAAGTGCCGTTAGTGACACTGGGTTACGAGAACAGCTACGACGTGTTT
GTGAAAGCCCATGGTGGCGGTCTCTCTGGTCAAGCCCAAGCCATTACTCTCGGAGTTGCTCGTGCCCTTCTCAAGGTGAGTGCGGA
CCATAGATCGCCGTTGAAGAAGGAAGGTTTGCTCACCAGAGACGCGAGAGTCGTTGAGAGAAAGAAGGTTGGGCTCAAGAAGGCCC
GTAAAGCACCACAGTTCTCCAAGCGTTAACGAGCTTCTTTTGTTTTGTTATTATTGTTGTTTTGGATATCAACTCTTATTCTAAGT
ACACTTCTTTGCCTCCAAAATTCTGTTTCTAAGTTGATGTGTAGATGATGAACTAATCTTTGTGTTGTTGATTGAATAGAATGCAA
AAGTTGTTATG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_177635 30S ribosomal protein S9 [Arabidopsis thaliana] | 941 | 1e-099 |
| BAD43279 putative ribosomal protein S9 [Arabidopsis thaliana] | 937 | 4e-099 |
| BAD44402 putative ribosomal protein S9 [Arabidopsis thaliana] | 934 | 1e-098 |
| XP_002889003 hypothetical protein ARALYDRAFT_476636 [Arabidopsis lyrata subsp. lyrata] | 931 | 2e-098 |
| XP_002326903 predicted protein [Populus trichocarpa] | 798 | 6e-083 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9XJ27 30S ribosomal protein S9, chloroplastic | 941 | 7e-101 |
| P82278 30S ribosomal protein S9, chloroplastic (Fragment) | 720 | 3e-075 |
| Q8DMK7 30S ribosomal protein S9 | 394 | 2e-037 |
| Q9MUV1 30S ribosomal protein S9, chloroplastic | 387 | 1e-036 |
| Q2JUJ9 30S ribosomal protein S9 | 381 | 6e-036 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q681W6 Putative ribosomal protein S9 | 941 | 1e-099 |
| Q681V1 Putative ribosomal protein S9 | 937 | 3e-099 |
| Q67Y29 Putative ribosomal protein S9 | 934 | 7e-099 |
| A9PB01 Predicted protein | 798 | 4e-083 |
| A5BPF9 Putative uncharacterized protein | 797 | 5e-083 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G74970.1 RPS9 (RIBOSOMAL PROTEIN S9); structural constituent of ribosome | 942 | 5e-102 |
| AT3G49080.1 ribosomal protein S9 family protein | 227 | 4e-019 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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