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Information for unigene UN44618

FASTA Sequence
Unigene ID: UN44618Length: 560 SSR 
GTGAATAAGGCCATTTATTAAGTAGTAAACATTGTTCAAGACAGAGAGATGGCCGTATGAGAGAAACGTATTATATATTGACAAGT
GGTAAATGACAGAAGCTTTGGTTTGGTCTCTCTCTGCTTCCCATCAAATCTCAGACCCCAAAAATAATATTCTTTTTCTCTTTCCT
TAATGTTGTTTTAGTTCATTAATCTTTTCCTTTACTTAACTTGAAGAAGTCTTAGCTTCTACGCTGCCACTGACGCTAGCTGAGTC
ACCACTAGTCTCCGCTGGCTCTTGACTGCTTAGCCCACTGACCATAGGAGCCGAAGCTGCAGCAGTCACAGCCTGTGTGGTGGTTG
GTACATCGCTCGAGCTTACTGGAGCTGATGCGCCGCTGAGTGATGATGATCCGATTGGGTATGGAGCCACTGGCATATCCGTTAGC
GAAGAAGCAGACGGGCTGTAGCTAAGCGAAGAGCTGCTGCTGCTGCTGCTGAGGCACTGGATGGTTGAATCTACATGTCAAACCAA
ATTTACACTGACCGGTTCTCAGGTAGTAAGAACACTCTTTCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ADK63414 CCCH type zinc finger protein [Brassica rapa]3474e-031
XP_002884577 hypothetical protein ARALYDRAFT_477944 [Arabidopsis lyrata subsp. lyrata]3376e-030
AAF08587 hypothetical protein [Arabidopsis thaliana]3214e-028
NP_187292 zinc finger CCCH domain-containing protein 34 [Arabidopsis thaliana]3214e-028
BAF02113 hypothetical protein [Arabidopsis thaliana]3162e-027

Swiss-Prot top hits (Blast detail)Scoree value
Q9SQU4 Zinc finger CCCH domain-containing protein 343212e-029
Q6NPN3 Zinc finger CCCH domain-containing protein 581529e-010
Q2R4J4 Zinc finger CCCH domain-containing protein 631313e-007
Q84W91 Zinc finger CCCH domain-containing protein 321277e-007
Q2QT65 Zinc finger CCCH domain-containing protein 661251e-006

TrEMBL top hits (Blast detail)Scoree value
A5B3A4 Putative uncharacterized protein1351e-006
B9RT23 Nucleic acid binding protein, putative1323e-006
B4FAP0 Putative uncharacterized protein1313e-006
B8BKF3 Putative uncharacterized protein1313e-006
B9GAM4 Putative uncharacterized protein1313e-006

Arabidopsis top hits (Blast detail)Scoree value
AT3G06410.1 nucleic acid binding / zinc ion binding3212e-030
AT5G18550.1 nucleic acid binding / zinc ion binding1529e-011
AT2G47850.1 zinc finger (CCCH-type) family protein1277e-008
AT2G47850.3 zinc finger (CCCH-type) family protein1277e-008
AT3G02830.1 ZFN1 (ZINC FINGER PROTEIN 1); DNA binding / nuclease/ nucleic acid binding1205e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information