 |
Information for unigene UN44678
| FASTA Sequence |
| Unigene ID: UN44678 | Length: 1145 |
SSR | | GGAACCAAATCGATTAAACACACATGAGTTCTGAAAAATCACTACAAGTCTTTTCTTGTCCTAAACATAAACCAAAAGACATTTTT
TTTCTTAAAGAGAGGTTAGCTTTCTTCATCTCCTAGATTTCAATGCTTATCTACTACACATATGAATCATCATCATCCACGCATTA
GATCAATGTCCATATGGGCGTGATGCATATCCATCGATCTTGAACCGGTTGACCACATCCCTACAGGAGTCTGAACAAGGTTCTGG
CTTTGTTGAGGAACAGGAGGAGGAGGTGATGTTGGTGCAGTGTTGTCGTTGTTCTCCAAACCATCAGTGTCTTGGACATCTTCAGA
AGCTTCATCTCGTTTTTTAATCTTTCCTTTTGGAACCGCCCAAAGGAAGCTCCCAACGATAACCTGAACAGGGCTTGCTGCTATCA
AAGGCCCAACAATTCCACCCCCAATGACACGACCATCAGGGCTAGCGAGTGAGACGGATAGGTTTCCAGTGCAGTTTGAGTAGTCA
TTTTCAGTTGCGTTCATGTAAGAAATTGAGAGAGATAAGAGCTCGAAACGACCCTCGTATTTAATAGCTCCATGAGAAGGTGATGG
CTGAAGAATAGTTGCGGTAGAGACTGCACCGGTAGTGGATAAGACACAAATCGCTCTTGGACCTTGCTGCGTAAAAGACATAACCT
TTGACGCAATGTCTTCACCAATGGAAACTACAATTACATGAGGAGTGAAGCTCATCCCAGACGATGAAGACATCAATTCACCAGTG
GAAGCAACTCTTCGCTTCTTACCTGAGCCAGGAGGTCTACCACGGCCACGTTTGTTAGAGCTTGGGGACATGGAGGCTGAAGGAGA
CAATGCCAAGGAAACAGGACCGTCTTGTCCGTATTTCCTAGGCCGTCCTCTCTTCCTCTTCTCACCAGACTGAGGAGGAGGAGCAG
CCGCTGAAGAGTCAGCCGGAGAAGACTCAATTGGTAAAGAAGGAGACACGAATGCAGTGGAGCCGCCGCCTACTTGGTTCAGGTTT
GGGTTTGAGACGAAAGGAGAGTTGGGGTTGGAGAAATGGTGAAACCCTTGTGATCCGTGAAACGGCTGTTGTGTCTGAGGAGGAGG
AGGAGGAGTAGAGCCAGGCATGCCTCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002878374 hypothetical protein ARALYDRAFT_324562 [Arabidopsis lyrata subsp. lyrata] | 1286 | 2e-139 |
| CAB71061 putative DNA-binding protein [Arabidopsis thaliana] | 1087 | 3e-116 |
| NP_191690 AT hook motif DNA-binding family protein [Arabidopsis thaliana] | 1087 | 3e-116 |
| NP_182109 AT hook motif DNA-binding family protein [Arabidopsis thaliana] | 931 | 3e-098 |
| XP_002511843 DNA binding protein, putative [Ricinus communis] | 775 | 4e-080 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9S7C9 Putative DNA-binding protein ESCAROLA | 216 | 1e-016 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8L7L5 AT-hook motif nuclear localized protein 11 | 1087 | 2e-116 |
| Q9M2D3 Putative DNA-binding protein | 1087 | 2e-116 |
| O80834 AT-hook motif nuclear localized protein 9 | 931 | 2e-098 |
| B9RDQ4 DNA binding protein, putative | 775 | 3e-080 |
| C6TK21 Putative uncharacterized protein | 736 | 9e-076 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
