Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN44768

FASTA Sequence
Unigene ID: UN44768Length: 802 SSR 
GATAGAAAGAGGGTATTTGATGGATGATTAAAAAGCAAACCATTTTGCAAATCGTCAAATAGACGTTTCAAACAACCACTAGGTTT
TGTATGGTGATACAGATTTGCTGGTGGTGCCCAAGTATGTATGGAATATAATGTAAAGAGAGAGAGAGGGAGACTCGATATTACTA
CGACCGTTTGCATAGCAGCAAACCTGGTCGCTTATTCTTCTGTAAAATTGACTTGTGATATGTTTTTGTTCATGACTTGACGTTGT
CTTTCGCGGCGTCAGTAGCATCGATGCCTCCTCCATCATCCTTGGCGTTGTCAGCAGCTGATGCACTAGCTTGGTCATCGAGAGGT
TCGTTGTTGTCAGCCTCAGCGTCTTCAGTGTTGTCGCCTGAAGACAAAGCCATCCGTCTTGCTCTAGGTTGCTGGTGCGGGGTTGG
CTGCAGTTTTGGTCGGAGAGCTTCCAAAGGCCCTTTAGGCTTTTGTCCTTTTTGCTTGCCTAATGCCCAATCAGCAGAGTCAAAAA
ACGCGCGCTCATGATCCTTGGAAATCAAAGGAATCTTCTTTGGCAACAATCCTCCATACTTTTTCTTGATCGCATTTTCCTCTGAC
TCAGATGATGGCTGTTTATGAACCTCAGTTTCATTCTTGTTATCGTTTTGGTCAACAGGAGGTGGAGTATCATCAACAAGCTCCTT
TCCCTTGACGTCTTCCATAACGAAAGGTGGATGAGGAACGCCGGTTAACCGTTAAAGAGATTCCGACGAGAACCGGGGTTAGATCG
GATCTTGTTTAGTTATGTGAGCTCCCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002887240 predicted protein [Arabidopsis lyrata subsp. lyrata]4893e-047
NP_564967 cAMP-regulated phosphoprotein 19-related protein [Arabidopsis thaliana]4742e-045
CBI31940 unnamed protein product [Vitis vinifera]3901e-035
XP_002272133 PREDICTED: hypothetical protein [Vitis vinifera]3872e-035
ACJ86098 unknown [Medicago truncatula]3577e-032

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9C787 Putative uncharacterized protein4741e-045
B7FMW5 Putative uncharacterized protein3575e-032
B9HXY7 Predicted protein3485e-031
B9S8Z2 Putative uncharacterized protein3371e-029
C6T2F7 Putative uncharacterized protein3252e-028

Arabidopsis top hits (Blast detail)Scoree value
AT1G69510.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lg106-like (InterPro:IPR012482); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64130.1); Has 92 Blast hits to 92 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).4748e-048
AT1G69510.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lg106-like (InterPro:IPR012482); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64130.1); Has 92 Blast hits to 92 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).4748e-048
AT1G69510.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lg106-like (InterPro:IPR012482); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64130.1); Has 92 Blast hits to 92 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).4748e-048
AT5G64130.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lg106-like (InterPro:IPR012482); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G69510.3); Has 93 Blast hits to 93 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).3027e-028
AT4G16146.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lg106-like (InterPro:IPR012482); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G69510.3); Has 94 Blast hits to 94 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1988e-016

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information