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Information for unigene UN44834

FASTA Sequence
Unigene ID: UN44834Length: 759 SSR 
GGACTTAAAGCTATATAACTTGAGGTTAGTTAGTTAGTACACAAGAAGATGGAAACAGAAGAGGATATGTGCCAGAACAATTGGGG
AAGTGCTTCCATCTTAGATTACAAGATGGCTATGGAGGAGGAGGAGGAGGAAGAGCCGCCTAATTTTCAAGATTTCAAAGCTTCTT
CGGGCCAAGCTTTCCTGCAAGGGATCAAGGCTCAACCGTGGGATCCGAGGACCATGCTGAGCAACCTGTCCTTTATGGAACATAAG
ATTCACGAAGTGCAGGGTCTTGTTCATCTCATCATCCTTGGCCGAAACGGGCAGCAGCTTCAAGAGGAGCAGCAACAACTCATAAC
CGCTGATCTTACTTCCATAATCATACAGCTGATTTCAACTGCAGGTAGTCTTCTTCCATCTGTTAACCATAATAATAATAATATGT
CGTCTACTACAGCCCCCGGTTCAGCCTTGTTCCCTTATCCAAGGGAGGCTGTTAACCTTGCTTCACAGACCCTAAACAACAACTGT
TGCGCCGCCGCCACCCAAGACCTCGATTTGCCTAAGCCCATTGTTGAAGAAAGCCATATACATGAAATGCAAAACGAAGATGATGC
CGAGGAAGGAGGAGAGGACCTTCCTCTTGGTTCTTACGAGATAAAGCAGCTTGAGAAAAAGAGATCCTCGCTCCCCACACCAACTT
CTGCACTATCTGTGGCAAAGTTTCAGAGAGACGCTAACTGAGATGCACATGAGAGGTCACGGCGACGAGTA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002891100 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]5583e-055
NP_174697 protein SENSITIVE TO PROTON RHIZOTOXICITY 1 [Arabidopsis thaliana]5342e-052
AAM65531 zinc finger protein, putative [Arabidopsis thaliana]5342e-052
BAF62149 C2-H2 zinc finger protein [Arabidopsis thaliana]5342e-052
XP_002325563 predicted protein [Populus trichocarpa]2941e-024

Swiss-Prot top hits (Blast detail)Scoree value
Q9C8N5 Protein SENSITIVE TO PROTON RHIZOTOXICITY 15374e-054

TrEMBL top hits (Blast detail)Scoree value
B9IQK8 Predicted protein2948e-025
B9MW64 Predicted protein2652e-021
B9SLH5 Putative uncharacterized protein2482e-019
A5BSF5 Putative uncharacterized protein2411e-018
C6T840 Putative uncharacterized protein2312e-017

Arabidopsis top hits (Blast detail)Scoree value
AT1G34370.2 STOP1 (sensitive to proton rhizotoxicity 1); nucleic acid binding / transcription factor/ zinc ion binding5373e-055
AT1G34370.1 STOP1 (sensitive to proton rhizotoxicity 1); nucleic acid binding / transcription factor/ zinc ion binding5373e-055
AT1G34370.3 STOP1 (sensitive to proton rhizotoxicity 1); nucleic acid binding / transcription factor/ zinc ion binding2273e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  100%

Unigene MembersMember information