Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN44851

FASTA Sequence
Unigene ID: UN44851Length: 848 SSR 
GATAAAACACTCGTTTATAAAGTAGAAGGGTTCACATTCACACCGGTTAAGATGTTCAAGAGAAGCAGCAGTACACGATATGAAAG
ACTCCAAAATGTAATCAGCACTAAGATAAAAACATAAATCATGCAAGAGAAGCAAAAAAGAGTTAACTCTCTGATCTTCTATTGCA
TTACTTTCTAAGCACACTCTTCTTACTCTTCGGTTTCAAACCACCACCAGACTCTTCTTTAGTAATCTTTGTCTTCTTCTTCGGCT
TTAACTCATCCTCACTCTTCTCCTTCAGCTTCCCCTTGGCCACCACTTTCTTCTTAGGAGGTTTCTCAGCCTCTGCAACCACACTT
ACCTCCTTCTTCCTCTTCTTCATATTCTTCTCCTTATCACCACTAGACTCCACAATCTCATTACTAACCTCAACATCACCAATCTC
GTCTTCATCAAGCACTTCGGATACATTACTATCCATATACCTAACCTCATGAATCCTACCCTTCTTCTTCTTCCCCTTCACTGCAT
CACTCTTCTCACCACCATCAACAGCAACACTTTCACCTTTCTTCTTCTTCTTCTTGTTCTCTTCCTCAACAACAACACCATCCTCA
CTTCCAAAAGCATCGATCTTCAGCTTCAAATCAGGAACACTCTGATAAACAGGCAACGCCAAGCTCTCAGACAGCTTCAAATGCAA
AGACCTAACATACTTCCATTTGAGGAGGGAGGTGACGGCTTCGTGGACAGTCTTGGGGCTTACTCTCGTGGTCTGTGGAGGTGGAA
GGAGTTGGTCTTGGGAGGGTGCGGCGGTTGTCATTGAGAGGTTTGCGGAGGGAAGAGATTAGGGTTTAAGGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002876472 hypothetical protein ARALYDRAFT_486318 [Arabidopsis lyrata subsp. lyrata]5782e-057
NP_191425 ribosomal protein L1p/L10e family protein [Arabidopsis thaliana]5011e-048
XP_002879998 hypothetical protein ARALYDRAFT_903637 [Arabidopsis lyrata subsp. lyrata]2969e-025
AAM76766 hypothetical protein [Arabidopsis thaliana]2871e-023
NP_181793 Ribosomal protein .1/L10e family [Arabidopsis thaliana]2852e-023

Swiss-Prot top hits (Blast detail)Scoree value
Q54LY8 Uncharacterized protein DDB_G02862991396e-008
Q2LZ59 Mps one binder kinase activator-like 21235e-006

TrEMBL top hits (Blast detail)Scoree value
Q9LXT5 Putative uncharacterized protein At3g586605011e-048
Q8L8B2 Putative uncharacterized protein At2g42650/F14N22.82877e-024
Q8RY41 At2g42650/F14N22.82851e-023
Q8S8D2 Putative uncharacterized protein2851e-023
A5BSP3 Putative uncharacterized protein2787e-023

Arabidopsis top hits (Blast detail)Scoree value
AT3G58660.1 60S ribosomal protein-related5016e-051
AT2G42650.1 60S ribosomal protein-related2857e-026
AT5G60030.1 unknown protein1136e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  100%

Unigene MembersMember information