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Information for unigene UN44877

FASTA Sequence
Unigene ID: UN44877Length: 728 SSR 
AGAGAAACTAGCCATTTTTCTTTTAGGTGTACAGAGTGCTGACTACAAACCATATAAAATTTTCGTAACATGTATATTATACACGC
ATATTGCATTTGCATATGTGTATTAAACATGCATACATACTATATTGTTTATTTAGATACTAATACATATAACGGAAGGTGTAAAT
ATGTGCTTTAGGATGTTGTGGAAATACGAGCTTGCTTGGGAAAATCACGGAAGATGGTAGTTGGAGGCATGTGGCCAATTTCATCA
CTCAATTGCTCTTTTTCTTCTTCTTCATATTCGTCATCCTCCACATCCCACAGAAACCTTGCGTATGAAGCTTGCACAGAAATCTT
CGGGGGACATTTTGGCAGCTTGTTGGAAATAGGAGTGGGCTCTTTTACGGTCGCCGTGGTTTTGCAAAATGATATCGGCGTATAGC
GAGAGAACGTTTCCATCGTTGGTGTTCCCCAAAATTGCTCTTTCACAGTACTCTTCTGCTTTCTTCATGTCTCCTCTCACCGGATA
GTATGGTTCACGATCATCATCATCATCATCATGAGCACCATGAATGTCAAATAGATAAGGAAGGCAAGGCTTGCAATTCAGGCACT
TGTTTCCACACGCGGGAGGCTTTGACCCAATAACCGATTTCTTCCTCTTTAGTTGTTGATCATGAGCGCCTGCTTGTGCAGACATG
CTGTGTGGAGATACGAGAGAAGATAAGATGTTGACAATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002887845 hypothetical protein ARALYDRAFT_477244 [Arabidopsis lyrata subsp. lyrata]2707e-022
NP_565230 tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana]2662e-021
XP_002887844 hypothetical protein ARALYDRAFT_477243 [Arabidopsis lyrata subsp. lyrata]2536e-020
NP_001077850 epidermal patterning factor-like protein 8 [Arabidopsis thaliana]2501e-019
ABK28321 unknown [Arabidopsis thaliana]2501e-019

Swiss-Prot top hits (Blast detail)Scoree value
Q1G3V9 EPIDERMAL PATTERNING FACTOR-like protein 82507e-021

TrEMBL top hits (Blast detail)Scoree value
Q9SSC6 F18B13.21 protein2661e-021
B9SMI5 Putative uncharacterized protein1909e-013
B9RV62 Putative uncharacterized protein1882e-012
B7FK92 Putative uncharacterized protein1872e-012
A5C422 Putative uncharacterized protein1863e-012

Arabidopsis top hits (Blast detail)Scoree value
AT1G80130.1 binding2669e-024
AT1G80133.1 unknown protein2506e-022
AT4G32340.1 EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: binding (TAIR:AT1G80130.1); Has 2680 Blast hits to 1282 proteins in 184 species: Archae - 2; Bacteria - 433; Metazoa - 1247; Fungi - 71; Plants - 657; Viruses - 13; Other Eukaryotes - 257 (source: NCBI BLink).1744e-013
AT5G20190.1 binding1663e-012
AT4G17940.1 binding1378e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

Unigene MembersMember information