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Information for unigene UN44918

FASTA Sequence
Unigene ID: UN44918Length: 793 SSR 
GGTAAAGGCGTCTTCTTGCTTATCCTAAGGGAGATAAGAAGGATGGTCACTTATCCTTGTATCTGGAGTTTGAAGATCCGGCTTCT
CTGCCACCGGGATGGTCAAGAGAAGTCAAGTTTACCCTCGCTCTCTTCACTAAAGCTTGGGGAAAATCGAGCATAGTATTGGGTAC
GCTCATGTTTTGTTAGCTCCTCATTATCATTACTCATTAATTAGCGCTTTGCAATATGATATTCTGTTTTGTCGTGGCAGGAGGGC
AATGTTGTTTCGATGTAAAGAATAAGGCTTGGGGTTATACTAAGTTCGTGTCCCTTGCTAAACTTCATGACAAGACTGAAGGGTTT
CTGGTGAATAGCAGACTCATTATCCTTGCTGAACTACATGTACTTCCAGCCTCTCTTGTTGTACCAGAGGAAACTCTCAAGATTAC
TGAACCTCTTAGCAGCCAAGCTGATGATGAATCCGTTGGAAAATCTCAGAGGGATTCTTCTTGTGAAGAAAATGAGGATTCAGACG
ATGATGGCGTATCTGAAGAGGGTTCTGATGATGATGATGATGATGGTCTTTCTGACGATGGTTCGTTTGAAGAGGATGTGGATAAT
GATGATGCTTCATCTCCTTTGTCAGATGATGATGGAGGTGAGGAAATAAGTCTTTTGAACCACTTCAGTGCCTTGGAAGAGGCTTC
TCATACCGTAGGGAATGATGGTGTAAAGAGTAACAGTGTGACAGCTGAGACTGAGGTTTCCAATGATGATGCACCTAAAGAAGATG
TCGGTGATGAGGATTCTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002878221 hypothetical protein ARALYDRAFT_486292 [Arabidopsis lyrata subsp. lyrata]2116e-015
NP_191403 TRAF-like family protein [Arabidopsis thaliana]2026e-014
P04929 RecName: Full=Histidine-rich glycoprotein; Flags: Precursor1571e-008
AAU04808 unknown [Atrina rigida]1515e-008
XP_002160678 PREDICTED: hypothetical protein [Hydra magnipapillata]1443e-007

Swiss-Prot top hits (Blast detail)Scoree value
Q8MP30 Uncharacterized histidine-rich protein DDB_G02745571826e-013
P04929 Histidine-rich glycoprotein1745e-012
Q17RH7 Putative protein TPRXL1432e-008
A9AUT1 Trigger factor1271e-006
P87179 Cell wall integrity and stress response component 11262e-006

TrEMBL top hits (Blast detail)Scoree value
Q9M2H2 Putative uncharacterized protein F14P22.302024e-014
Q5Y828 Putative uncharacterized protein1513e-008
Q5Y827 Putative uncharacterized protein1471e-007
Q6VBJ3 Epa4p1433e-007
Q3MJK9 Cement protein 3B variant 11407e-007

Arabidopsis top hits (Blast detail)Scoree value
AT3G58440.1 meprin and TRAF homology domain-containing protein / MATH domain-containing protein2023e-016
AT3G58270.1 meprin and TRAF homology domain-containing protein / MATH domain-containing protein1432e-009
AT3G58270.2 meprin and TRAF homology domain-containing protein / MATH domain-containing protein1432e-009
AT3G58210.1 meprin and TRAF homology domain-containing protein / MATH domain-containing protein1314e-008
AT3G58420.1 meprin and TRAF homology domain-containing protein / MATH domain-containing protein1252e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

Unigene MembersMember information