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Information for unigene UN44922
| FASTA Sequence |
| Unigene ID: UN44922 | Length: 944 |
SSR | | GAGAAACACAAAAGATGTTCAAAATTATTACATATGTATTATTACAAACGTCTCACATATTTAACTTAAGTTCATTACATATAATT
ATAGCATATAAATCGTATCTACACACCAACATATGATGCAGATCAAAACAGACAATTAAAAGAAAAATAGTAGATATGAAACAAAT
ACTTTCATAGTAAAGCCCACAATTAACACTCATCAATGTGTTAATCAAATATACGATCATTACCTCTTAATCTTTTAACTTCAAGC
TCTACTCTTGCATTTCTCCATTGCTCTCGGAGCAAGACCAATGGCGTCAGATCCTTTCATGAGACGTAAACGCTTGCATGTATCAA
CGAACATTGGCCAAGGGACGTCGCCGACGAGCATCCAATCACCGTCTTTGTCTTCGTAAGAGGGAACATAGTCCCAACCATTCACT
ATATCCATTACTTTCCTCTCATTCATGAAGTCTATCATTCCTTCTTCTCCTCCATTTTTCCCCATGGTAAAAGAGCTGAACATGTT
AGACAAAGCATTAGAGAGTTCGTCGTAGCTCTTATACATCTTCAAGTCGACTTTCCTTAAGTACGGTGCTCCGTCCATTGAAACCT
TCACAAACGCCCACAACTTGTGCCTTGGCTGGAGGCTTGGCTGGATCTTTGGGACATGAACTCTTTTCCTTGGAAACAGAAGCCAC
GATGTCATGAGGCTTAGATCCTCCCTTGCTTTCAGGTTCATTGTTCAGATTCAGCTTCAGATCAACCGTCTCCGAGAAGCCTCTCT
TGGTTCCAGTCACTGGGGCCGCCGTATCCCCGCCGGGAAGACCAAGACACAACTCAGTCTCCCTCAGATTCAGCTCGACACTGCCC
ATCATTGCTAATCTCTCTTCTTTTTCAATAATCTTCTTCTTCTTCTCGGGAAGGTGATGAGGAAGATGGGGAAATGGTTTTTAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002889499 hypothetical protein ARALYDRAFT_470401 [Arabidopsis lyrata subsp. lyrata] | 618 | 5e-062 |
| BAJ33922 unnamed protein product [Thellungiella halophila] | 618 | 5e-062 |
| NP_171921 auxin-responsive protein IAA17 [Arabidopsis thaliana] | 617 | 6e-062 |
| AAC39440 IAA17/AXR3-1 protein [Arabidopsis thaliana] | 617 | 6e-062 |
| AAM64837 putative auxin-induced protein, IAA17/AXR3-1 [Arabidopsis thaliana] | 617 | 6e-062 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P93830 Auxin-responsive protein IAA17 | 617 | 3e-063 |
| Q38832 Auxin-responsive protein IAA14 | 502 | 6e-050 |
| O24407 Auxin-responsive protein IAA16 | 502 | 6e-050 |
| Q38825 Auxin-responsive protein IAA7 | 485 | 6e-048 |
| P0C132 Auxin-responsive protein IAA30 | 472 | 2e-046 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A0MWP6 Auxin/indole-3-acetic acid | 524 | 3e-051 |
| B9HUN7 Predicted protein | 517 | 2e-050 |
| A5B9V1 Putative uncharacterized protein | 516 | 2e-050 |
| B9RTF4 Auxin-responsive protein IAA7, putative | 514 | 4e-050 |
| A5H273 IAA6 (Fragment) | 511 | 9e-050 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G04250.1 AXR3 (AUXIN RESISTANT 3); transcription factor | 618 | 2e-064 |
| AT3G04730.1 IAA16; transcription factor | 503 | 4e-051 |
| AT4G14550.1 IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14); protein binding / transcription factor/ transcription repressor | 503 | 4e-051 |
| AT3G23050.1 IAA7 (INDOLE-3-ACETIC ACID 7); transcription factor | 486 | 4e-049 |
| AT5G65670.2 IAA9 (INDOLE-3-ACETIC ACID INDUCIBLE 9); transcription factor | 422 | 1e-041 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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