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Information for unigene UN44930
| FASTA Sequence |
| Unigene ID: UN44930 | Length: 828 |
SSR | | GATTCACTCTCATAAGAAGCTAAAAACTCCTTCAACTCAAGGTCTGCCAACTGATCAGGGTTGAATTTCTGGGTTAAGGTATTCAC
GCGGTGCGGCTCATCTTCATCCCAAGAAATATTAACCTTACTCATCTGCAATGCTTGGCTTTGAAAATCCAAAGCTTGATAATTAG
CAGGTGCCTCGGTGGCAATACACGAGGCGGATGATTGAAACCAATGGAGTCGGGAATAAATCTCAAGTCGAGCTTGTTAGAGGATC
TTTGAAACTCAAATCCATCACATGATTTGTACAAGTAATCAGCAGTAGCACTAGAATCACATTCCACAACACCAACGTAGTACTTA
AATTTACTTTTTTCGTATTCACGTATTCTCTCATTGATTGCCTCCTTGTCTTCATCTCCATCGTCATCATTTTCTTCCTTCTTTTT
GTCTCCACCACGAATAATAGCAAGAGGACCATGCATTTCCTCATGTTTCATTCGCTCAAGCCCAAACTCTGTAGGATAGACCGCAA
CAGACAAGACGCGCCCATCTTTCTTGAGGAAGAATCGAGAACAACGTACAAGTCTATGGCAGTAATATGTATCCAGTCAATGTTGA
CAATAGCCAGTCTGTGAGTTTCTTTTTCAATATTGGCTATCTCCTCCTCTTCCGGAATTTCGGGTTCACTGTCCTCATGCACAACT
GCTTCATCGTCCTCTTCGAATACTTCTTCGCTGTCTTCTTCCTCCTCATTAGACTCTGCACTCTCATCATCATCATCATCATCAGA
TTCTTCTTCATCCGAATTAAAAGCAAGCTTCTTCTCACTCTTACTCTGCTTCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_566132 uncharacterized protein [Arabidopsis thaliana] | 433 | 1e-040 |
| XP_002882196 hypothetical protein ARALYDRAFT_317076 [Arabidopsis lyrata subsp. lyrata] | 430 | 2e-040 |
| XP_002534037 Pre-rRNA-processing protein ESF1, putative [Ricinus communis] | 400 | 7e-037 |
| XP_002269957 PREDICTED: hypothetical protein [Vitis vinifera] | 399 | 1e-036 |
| CBI25839 unnamed protein product [Vitis vinifera] | 399 | 1e-036 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q76MT4 ESF1 homolog | 261 | 4e-022 |
| Q3V1V3 ESF1 homolog | 260 | 6e-022 |
| Q9H501 ESF1 homolog | 256 | 2e-021 |
| O74828 Pre-rRNA-processing protein esf1 | 169 | 2e-011 |
| Q75JC9 Uncharacterized protein DDB_G0271670 | 133 | 3e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9MAC6 T4P13.15 protein | 433 | 8e-041 |
| B9T718 Pre-rRNA-processing protein ESF1, putative | 400 | 5e-037 |
| D5ABU9 Putative uncharacterized protein | 358 | 4e-032 |
| A9TP42 Predicted protein | 331 | 5e-029 |
| Q17MJ7 Putative uncharacterized protein (Fragment) | 306 | 4e-026 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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