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Information for unigene UN44944

FASTA Sequence
Unigene ID: UN44944Length: 742 SSR 
TTTTAGCAAGAACAATAATGTATATTTAATTGATGTAGCCAAAACAAAGTTGATAAGAGAAACTCAACGAGAAGAGGAGGAAGAGG
AAGAAGAAGAATTGAAGTTAACAACAATCTAACACGAACAGAAGGTTTTTGTCGTTGTCATTTGTTGAAAACTACTCTGCTCAACC
GATCTGCTTCCTTACTTACCATTGCGATTTTTGAAAACAGAGCCCGAACCAGATTCAATAGAAGCAAAGCCATTTCTTCTTTTCAC
GTGGGGGTGGCGACGAATTACGTTTCTTGCGATGGTTGTTGTTCTGTTGATGACGATGATGACGACGGTTGTTGTTCTGTTGAGGC
TCGTTGTTTGTTGGAGGTGTAACAAGACTCTCAGGTCCCGCAACAGCTGTTTTCTTGGTCTTCTTGTCGTCACGAGCGTTGTTGAA
GATGACGGTGAATCCTTGGGCGGCGCCTGGATTAGTCGCCGCGTCCCATTCCCCAAATTTTGGCAGTTGTCTTCCTTTGTTTCCCG
TTGCCATTGTCGGTATTAGAACAGAGGATCTTGGTTCTGATACGAGGAGAAGCCAGAATCTAGAGAGAGAGACAAAGACAATGATG
ATAATCTGGGAAAATAGGAGATGAAATTGTAATAATAGAGGAGGAGGAGGAGGAGGAGAGAGGACGATCACGTCGTCGTTGGAAAC
GCATCAACAATCTCCTTTTTTTTTTTTTCATATACACACCTTTCTCTTTCCCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002877610 hypothetical protein ARALYDRAFT_485205 [Arabidopsis lyrata subsp. lyrata]3012e-025
NP_566905 RPM1-interacting protein 4 (RIN4) [Arabidopsis thaliana]3002e-025
XP_002866545 predicted protein [Arabidopsis lyrata subsp. lyrata]2106e-015
NP_201132 RPM1-interacting protein 4 (RIN4) [Arabidopsis thaliana]2071e-014
XP_002322218 predicted protein [Populus trichocarpa]1694e-010

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8LCF4 At3g484503054e-026
Q9FMJ6 Similarity to NOI protein2071e-014
B9IF41 Predicted protein1693e-010
B9I3K8 Predicted protein1631e-009
C6T2V0 Putative uncharacterized protein1487e-008

Arabidopsis top hits (Blast detail)Scoree value
AT3G48450.1 nitrate-responsive NOI protein, putative3412e-032
AT5G63270.1 nitrate-responsive NOI protein, putative2076e-017
AT5G55850.1 NOI1386e-009
AT5G55850.2 NOI1386e-009
AT5G40645.1 nitrate-responsive NOI protein, putative1342e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  100%

Unigene MembersMember information