RadishBase

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Information for unigene UN44949

FASTA Sequence

Unigene ID: UN44949	Length: 932	SSR
GTTAGAAGTCAATATACTAAATTAAAGAGCAAAAGAAATATAAACAATTCAGTCATTGTCGAAAAAAATAAGCAACATAAAAAGAG AAGAATACAAGTTTCGATTAAAACCTTCGTACAAATAGGAAGGGACATTTTAGAGCGAATCAGAAATGTTGGAATAAAACAAGGCA CCAGCTGCCTGGTCTGTCTGTCTCGTCTTAAAACTTCAATTTTACAACTTTCTTTTAAGTTCCACAGCATGCAGACTTCTGTGTGG CCTGCCCGGCACCAGCTGCCTGGTCTGTCTGGCTTATCTTAATCGTCGCAGGCTCAGCCCTGGAGTCAGTGTCAGAAAGCCTCTGC TTGATGTCCCTCCCTATCGAGAAGAAAACTTCTTCCACGTTTAGGTTTGTCTTAGCACTTGTTTTGAAGAACTTAATTCCGTACTC ATCAGCAAGAGCCTGACCCTTTGCTGTAGGTACAGCCCTCTTGCTTTCATCCATGTCAGCCTTGTTACCAACCAAGATCTTGTTAA CATTATCAGAAGCATGTTGTTCGATATTACGAATCCAGTTTCTAATGTTGTTGAAGGAAGACTCGTCTGTGACATCATAGACAAGC AAAATCCCCATTGCCCCACGGTAATAAGCAGTGGTGATAGTGCGGAAGCGTTCTTGACCAGCAGTGTCCCAAATCTGGAGCTTGAT ACGTTTCCCATCAAGCTCAATCGTTCTGATCTTAAAGTCAATGCCAATGGTGGTGATGAAGCTTAATGAGATAATCATAATCAGCT CTGGCCCTAGCAGGTGGAGCAGCCATCGATTCGATTCGATTCCGACGATGATGAAAGGGAACCGAGATGTAGTCGGAGAGACAGCG ACGGTTATGCGGACGGCTAAAATGCGCCACTCCTCGATTCAGCTTCTCTTCTTCTTCTTCTTCTTCTTCCGC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
NP_190192 Ras-related protein ARA-3 [Arabidopsis thaliana]	882	1e-092
BAJ34629 unnamed protein product [Thellungiella halophila]	872	2e-091
NP_200792 Ras-related protein Rab-8A [Arabidopsis thaliana]	857	9e-090
XP_002866353 hypothetical protein ARALYDRAFT_496120 [Arabidopsis lyrata subsp. lyrata]	852	3e-089
AEA92304 Rab2 [Hevea brasiliensis]	839	1e-087

Swiss-Prot top hits (Blast detail)	Score	e value
P28186 Ras-related protein ARA-3	882	5e-094
Q39433 Ras-related protein RAB1BV	759	9e-080
P20790 Ras-related protein Rab-8A	582	3e-059
P20791 Ras-related protein Rab-8B	571	6e-058
P36861 GTP-binding protein yptV2	558	2e-056

TrEMBL top hits (Blast detail)	Score	e value
Q9FJF1 Putative GTP-binding protein ara-3	857	6e-090
B9GER9 Predicted protein	829	1e-086
A5C254 Putative uncharacterized protein	828	1e-086
A9P9D8 Predicted protein	828	1e-086
B9T4D9 Putative uncharacterized protein	827	2e-086

Arabidopsis top hits (Blast detail)	Score	e value
AT3G46060.1 ATRAB8A; GTP binding	883	4e-095
AT3G46060.2 ATRAB8A; GTP binding	883	4e-095
AT3G46060.3 ATRAB8A; GTP binding	883	4e-095
AT5G59840.1 Ras-related GTP-binding family protein	858	3e-092
AT3G53610.1 ATRAB8; GTP binding	825	2e-088

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


12	2			100%

Unigene Members	Member information