 |
Information for unigene UN45003
| FASTA Sequence |
| Unigene ID: UN45003 | Length: 920 |
SSR | | GGGAACCACATCTCCCATTTTCATTCATCATCATCATCATCATCGCTTTGATCGTCACACTAAGATTTCAGTTTTGTGGCTTCCGT
GGAGGTCAGATCTTGGACGATCTCCAGCTTAAAGAGAAGAAGTAGGAAGTAAAGGCAAAAGGGGGTTGAAGGATGTCTTCTTTCAC
AGGAACTCAACAGAAGTGCAAGGCTTGCGAGAAGACGGTCTACCCTGTGGAGCTTCTCTCAGCTGATGGAGTTAGCTACCACAAGT
CCTGCTTCAAATGCTCTCACTGCAAATCCAGGCTTCAGCTGAGTAGATATTCATCGATGGAAGGTGTGGTGTACTGTAAGCCTCAT
TATGAGCAGCTATTCACAGAGTCTGGTAGCTTCGCCAAGAACTTTCAGTCACCTGCAAAACCAGCTGAGAAATCAAGTCCTGAGCT
GACAAGGACTCCTAGCCGAGTTGCTGGTATGTTCTCTGGTACACAAGAAAAATGTGCCACTTGCAGTAAAACTGTGTATCCTATCG
AAAAGGTAACAGTGGAGAGCCAGACATATCACAAGTCCTGCTTCAAATGCTCACATGGAGGCTGCCCAATTTCTCCTTCAAACTAC
GCAGCTCTTGAAGGAATCTTGTACTGCAAGCACCACTTCGCTCAGCTTTTCAAGGAAAAGGGTAGTTACAACCACTTGATCAAATC
CGCTTCCATCAAACGCTCTGCAGCAGCAGCAGTAGCCGCTGGTACACCAGCAACAGCGGTTCCTGAATCTTAAATTCAAGGATTAT
CTCCTCTCTCTAGTTTAAGCTGAAGTTAATGCCAAACTGATTCAGTTTGTTTTCTCTTTGTGTGTGAGTGTGTGTTCTTTGTTTCT
ATTGATGTCTCCTGAAGTCTTTGTGTTGTTATCTATAAAAAAAGTTTGATACATTCCTTT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_191136 GATA type zinc finger transcription factor-like protein [Arabidopsis thaliana] | 983 | 2e-104 |
| XP_002876333 LIM domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 978 | 8e-104 |
| BAH20111 AT3G55770 [Arabidopsis thaliana] | 976 | 1e-103 |
| ACU23614 unknown [Glycine max] | 884 | 7e-093 |
| XP_002530411 Pollen-specific protein SF3, putative [Ricinus communis] | 865 | 1e-090 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P29675 Pollen-specific protein SF3 | 543 | 1e-054 |
| Q4U4S6 Xin actin-binding repeat-containing protein 2 | 232 | 1e-018 |
| Q4KM31 LIM domain-containing protein 2 | 215 | 1e-016 |
| Q9ERG0 LIM domain and actin-binding protein 1 | 213 | 2e-016 |
| Q1LZA7 LIM domain-containing protein 2 | 212 | 2e-016 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9M047 AT3G55770 protein | 983 | 2e-104 |
| B9DH94 AT3G55770 protein | 976 | 1e-103 |
| O04193 At2g39900/T28M21.6 | 942 | 9e-100 |
| C6TL24 Putative uncharacterized protein | 884 | 5e-093 |
| B9SWP2 Pollen-specific protein SF3, putative | 865 | 7e-091 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
