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Information for unigene UN45020

FASTA Sequence
Unigene ID: UN45020Length: 975 SSR 
GAAACGAAATTAAAGACTATTTTTTTCCTCAATAACATTGCTACATATGCATCTATATTGTGTATATGTCCGTATTATACATTAAA
AAAATTCATGTATCTTCTTTACATGGAACTCCAAATCTAAAAAAGAAAATAGAAAAAGAAAATCACTTGGATATGGAACTATCTCA
TCTAACAAAACCCTGAAGGATTTGTTTATGGTGTAGTCAACTACTCAAACACCGATCAGATCCAAATCAAATAAAGGGTTTCAATC
ATCAAAAGCTCTCATCGAAGTCTCTTCGACATCATCATCATAGGGCAGAGTCTAAAGCAAGAGCATCAGATCCTTTCATGATTCTG
AGTCTCTTACAAGAGGAAGAGAACATATCCCATGGCACATCACCAACCAACATCCAGTCTCCATCTTTATCCTCGTATGTTGGTAC
AACTTCAGATCCTTTGTATCCTTCTCTTTCGCAGTATTCACCGATCGTGAACTTGAACATGTTCTCCAACGCCTTGAGAAGCTCTG
GATAGTTTTGTACGTTTTGAGATCTATTTTACGGAGGTATGGTGCTCCGTCCATACTCACTTTCACATAGCTAACACTGTTGTTGT
TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTCTTACGGTAAGATCTCACCGGAGGCCAACCGACGATTTGAGTTTTT
GTAGAAGGTGTAGTCGATTCTTCCTCGTTATCGCTTTGTAGTTGACGCTTGTTGCTTCTAACGCAAGAAACGTCTTGTTCTTCTTT
AACTTGTTCTGTTCCAGGTAATCCAAGACGAAGCTCTGTGTCCTTAAGGTTAAGCTCGTTGACTTTCTCATACGCCATTCTTCTTT
TTCAAGATCAAGAAGTCTTATCTCTCTATGTTCTTGTGTGGTTTCCAACGCAGAATCCTTCTCTTGTTCTTGTTATGGTTCTTCTT
CTTGTTTGTGAGTTTGGTTGAAGATGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002885542 indoleacetic acid-induced protein 2 [Arabidopsis lyrata subsp. lyrata]3758e-034
NP_188943 auxin-responsive protein IAA2 [Arabidopsis thaliana]3694e-033
AAB97164 auxin-responsive protein IAA2 [Arabidopsis thaliana]3694e-033
ADC29363 indole-3-acetic acid inducible 2 [Arabidopsis thaliana]3694e-033
ADL70486 indole-3-acetic acid inducible 2 [Arabidopsis thaliana]3694e-033

Swiss-Prot top hits (Blast detail)Scoree value
P49678 Auxin-responsive protein IAA23692e-034
P49677 Auxin-responsive protein IAA13404e-031
P33077 Auxin-responsive protein IAA43234e-029
P32294 Auxin-induced protein 22B3208e-029
O24542 Auxin-induced protein 22D3144e-028

TrEMBL top hits (Blast detail)Scoree value
D3K0A7 Indole-3-acetic acid inducible 23693e-033
D3K0B1 Indole-3-acetic acid inducible 23693e-033
D3K0A4 Indole-3-acetic acid inducible 13406e-030
Q67YC2 Auxin-responsive protein IAA13406e-030
A9PIH9 Putative uncharacterized protein3362e-029

Arabidopsis top hits (Blast detail)Scoree value
AT3G23030.1 IAA2 (INDOLE-3-ACETIC ACID INDUCIBLE 2); transcription factor3701e-035
AT4G14560.1 IAA1 (INDOLE-3-ACETIC ACID INDUCIBLE); protein binding / transcription factor3403e-032
AT5G43700.1 ATAUX2-11 (AUXIN INDUCIBLE 2-11); DNA binding / transcription factor3233e-030
AT1G04240.1 SHY2 (SHORT HYPOCOTYL 2); transcription factor3037e-028
AT3G04730.1 IAA16; transcription factor2033e-016

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  100%

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