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Information for unigene UN45021
| FASTA Sequence |
| Unigene ID: UN45021 | Length: 872 |
SSR | | GAAAGAAACATGCAGGCTCCATATAACCTCAAGACTGAGAGTGTGGCGGGTAAAGTAGATTACAAAAGTTCTTTGGTGAAAATCTG
TCGAAAGCACTGAGGATAGGGCTTGCCACATAGACATTGTTCAGAATGTGTAATTGACCTAAAACGTTTTGTGACGAAAATTGAAA
GAAAAAGTAAAAACCCCACGATAAAAGACAAGACGTATCAGTTATGCAAGCTCATGAAGCTTGGTGTCAATTCCAACCGTCACTTT
CATTCCCATTAGCACCGACCTGGGGAGGTTCTACCACAGCATGTGAGCTTCCTGTCGAATCCGGGAGCTGGATGGAATGGTCAAAT
CTACAAGCTGGGCCAAATTTGCAGATGCCGTAGCGACTGTAATGTGTGCAGATGACTTGATCCTAGATTTCAGTTCAAGTCAAAAA
GAGTCCATCAAACATCAAAGAAGAGAGAAGCAGAGAAGGAAAAAAAAAAGACAAACGAGCTTACAGGCCTAAGGGGCAAGCCCTTG
TCATTGAGAGCATAAGGAGGCTGTTTCGGCAAACGATTCTTAGGATGATGGTATTTGCAAGTGAACTTGAACTTACAATCCCCAGT
TTTAAGATAGTAACTGCACTCAGGCTGGTCCGGACGTTCTGGAAACTCCTCAGCAGGTTTTTGATATTTGTATGGTGTGAAAATAC
TTGTTTCAGCTGATGAGTTGTTGTTGTTGTTCATAAGGTATGTGGTGGAAGTAGAAAACACACTCCTTTCTGATGGATACATAGTA
GTAGCAGCCTGATAGCCATTCCACTCGGGAGTTTGAGATGAAGCTCCACGACTCTGAGACAACATGGATGGAATAAAAGGAGCAGT
GCCGTTGGTATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002875904 zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp. lyrata] | 523 | 4e-051 |
| NP_190414 zinc finger CCCH domain-containing protein 43 [Arabidopsis thaliana] | 521 | 8e-051 |
| XP_002864843 zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp. lyrata] | 460 | 9e-044 |
| NP_201131 zinc finger CCCH domain-containing protein 67 [Arabidopsis thaliana] | 436 | 5e-041 |
| AAV66094 At5g63260 [Arabidopsis thaliana] | 436 | 5e-041 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9STM4 Zinc finger CCCH domain-containing protein 43 | 521 | 3e-052 |
| Q5RJC5 Zinc finger CCCH domain-containing protein 67 | 436 | 2e-042 |
| Q3ECU8 Zinc finger CCCH domain-containing protein 13 | 221 | 2e-017 |
| Q5JLB5 Zinc finger CCCH domain-containing protein 12 | 217 | 6e-017 |
| Q9SQU4 Zinc finger CCCH domain-containing protein 34 | 217 | 6e-017 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9I3K6 Predicted protein | 349 | 5e-031 |
| B9IF40 Predicted protein | 332 | 4e-029 |
| B9RAN9 Nucleic acid binding protein, putative | 327 | 2e-028 |
| A2WYD1 Putative uncharacterized protein | 217 | 9e-016 |
| B7F4E1 cDNA clone:001-030-A08, full insert sequence | 217 | 9e-016 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G48440.1 zinc finger (CCCH-type) family protein | 521 | 3e-053 |
| AT5G63260.1 zinc finger (CCCH-type) family protein | 436 | 2e-043 |
| AT1G48195.1 zinc finger (CCCH-type) family protein | 221 | 2e-018 |
| AT3G06410.1 nucleic acid binding / zinc ion binding | 217 | 5e-018 |
| AT5G16540.3 ZFN3 (ZINC FINGER NUCLEASE 3); DNA binding / nuclease/ nucleic acid binding | 205 | 1e-016 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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