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Information for unigene UN45052
| FASTA Sequence |
| Unigene ID: UN45052 | Length: 653 |
SSR | | GGGAACAAAGCAAATAATAAGAAGAAGAGTCTTCCGTAGATTTGGTCTATATGAGGGAGGTGTATGGAAGATCAAAGTCGAACTTC
CTGAAGTTTATCCTTATAAATCTCCTTCTGTTGGTTTCGTTAACAAGATTTATCACCCCAATGTTGATGAATCTTCGGGTGCTGTT
TGCTTAGATGTAATAAACCAGACATGGAGCCCAATGTTTGATCTTATCAATGTCTTCGAGTCATTTCTTCCTCAACTGCTTCTATA
TCCAAACCCATCTGATCCATTCAATGGAGAAGCTGCCTCTCTCTTGATGCGAGACCGTGCAGCCTATGAGAAGAAAGTCAAAGAGT
ACTGCAAAGCATATGCTAAACCAGAGGACATAGGAGCACCTGAGGATTTAAGTGATGATGATGAAGATGACGATGATGATGATGAT
AGCATGAGCGAACGTGGTTCAGACTCTGATGACAACGGCGATGAAATCGCTGGAAAAGCAGATCCTTGATGATGACTTGTGTGTGT
GTTACAAATCAACCTTTCTTTGCACTTCATTTCCATATATATAAACCCATTGATGTTCATTCCATATAGAGGAGAAAAAAAAAATC
ACTCCTCTGTAAATTTGTAAACACTATTTAATTCTTTAGGAATATTGAAAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002882046 ubiquitin-conjugating enzyme 6 [Arabidopsis lyrata subsp. lyrata] | 659 | 4e-067 |
| NP_566062 ubiquitin-conjugating enzyme E2 6 [Arabidopsis thaliana] | 603 | 1e-060 |
| ACR35682 unknown [Zea mays] | 586 | 1e-058 |
| NP_001132171 hypothetical protein LOC100193596 [Zea mays] | 579 | 8e-058 |
| ABB47726 Ubiquitin-conjugating enzyme E2-23 kDa, putative, expressed [Oryza sativa Japonica Group] | 574 | 3e-057 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P42750 Ubiquitin-conjugating enzyme E2 6 | 603 | 6e-062 |
| P42748 Ubiquitin-conjugating enzyme E2 4 | 553 | 4e-056 |
| P16577 Ubiquitin-conjugating enzyme E2-23 kDa | 544 | 4e-055 |
| P42749 Ubiquitin-conjugating enzyme E2 5 | 543 | 6e-055 |
| Q9P7R4 Ubiquitin-conjugating enzyme E2 8 | 452 | 2e-044 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C4J3D2 Ubiquitin carrier protein | 586 | 9e-059 |
| B4FFL4 Ubiquitin carrier protein | 579 | 6e-058 |
| B8BH65 Ubiquitin carrier protein | 574 | 2e-057 |
| Q337R4 Ubiquitin carrier protein | 574 | 2e-057 |
| C5X0C7 Ubiquitin carrier protein | 571 | 5e-057 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G46030.1 UBC6 (ubiquitin-conjugating enzyme 6); ubiquitin-protein ligase | 603 | 6e-063 |
| AT5G41340.1 UBC4 (UBIQUITIN CONJUGATING ENZYME 4); ubiquitin-protein ligase | 553 | 4e-057 |
| AT1G63800.1 UBC5 (ubiquitin-conjugating enzyme 5); ubiquitin-protein ligase | 543 | 6e-056 |
| AT3G08690.1 UBC11 (UBIQUITIN-CONJUGATING ENZYME 11); ubiquitin-protein ligase | 220 | 2e-018 |
| AT1G64230.1 ubiquitin-conjugating enzyme, putative | 219 | 2e-018 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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