RadishBase

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Information for unigene UN45076

FASTA Sequence

Unigene ID: UN45076	Length: 1026	SSR
GGAACCAACTTTGGCTTGTCTATTCATATCATTTTTTTAAAGTCAAATAACCGCTGAATTTGTTCTTGCCTTAAGAAAGAGACAAG AGACGAGATACTTCATTATACAAGTTGAAATAAAATGCTAACAATAAAAAAAACGCCACCAAACGTGTAAATGAAACGAGTCCATC AAACACCATTACAAATCCCTTTCACGCTCTCTCCTCTCTCTCTCTACCTTGTTACCGGATGCCTTCTCCTCTTTGGTCGGATTCTA TCTTCTTCATAGTCCATCACTCCACTTGGTTCCCCAAACATCTCTTTATGCCCTCTTCATGGACAGAGACTTCTTCACTTCTTCCA CTCTCTCTTCTGCTTCCTTGCGATGTTTTTTGTCTGTCTCACTCATATTGTCCGCCCATTTTATCTTGTCTTGAATTGAACCGAGA AGATTTTCTGATGTGTTCAACCAGTTGGACAAAGTGTGTAACATATTCCCAAGTTGTCCAGGCCTTAGATCTCTACCAGCTGCAAA TGGAACCTCGAAGCATCTTTTCAACTGATCAAGTTTTCCTCTAACTATACCCGCGTACATGCATTCATTGATAAGAAAGTCCTCGA GCTCACGAACATTGGTGACATCTAACTCGGCCATGAGTGTATCATAAGGCAAAACCTTGTTTGACTCGGCAAGGGTAAGCACAGTG AGCTGTTTTAGCTTCAGAGTTTGGTCAGGAGGCAACTGAGGGATACGGCTAGCATTGCATTTGTAGTCAGCCCAGGTGCCATGAGC AAATAAGCGCAGAACATCAAGGTACACTGAATGTGTGCTTCCTTCAAGCTGGGCAACGTTGGGAAGAGCCAAAATCTCGGAGAAGG CGAAAAGAGAAGGATGCGATGTTGCTTCGATGATGATAGGCAACAGGGCCTCGCCGTTGCAGGTAGAAGCTCGGCGAACGAGCTGG TCGATTATCTCCGACTGCTTCTGCTCCATATCCATTCCACTTTTTTAGGGTTTTTCCACACCAAAACAGATCCGATTTCC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
NP_849576 COP9 signalosome complex subunit 7 [Arabidopsis thaliana]	1043	3e-111
NP_563645 COP9 signalosome complex subunit 7 [Arabidopsis thaliana]	1038	1e-110
NP_973739 COP9 signalosome complex subunit 7 [Arabidopsis thaliana]	1038	1e-110
XP_002889334 hypothetical protein ARALYDRAFT_470065 [Arabidopsis lyrata subsp. lyrata]	1022	8e-109
CAN69751 hypothetical protein VITISV_024935 [Vitis vinifera]	915	2e-096

Swiss-Prot top hits (Blast detail)	Score	e value
Q94JU3 COP9 signalosome complex subunit 7	1038	5e-112
Q55BD5 COP9 signalosome complex subunit 7	428	3e-041
Q2KI56 COP9 signalosome complex subunit 7b	389	9e-037
Q9H9Q2 COP9 signalosome complex subunit 7b	389	9e-037
Q8BV13 COP9 signalosome complex subunit 7b	388	1e-036

TrEMBL top hits (Blast detail)	Score	e value
Q3EDL1 Putative uncharacterized protein At1g02090.3	1038	8e-111
A5B6P4 Putative uncharacterized protein	915	1e-096
B9GP61 Predicted protein	915	1e-096
B9RCZ8 Cop9 complex subunit 7a, putative	911	4e-096
A9PEE7 Putative uncharacterized protein	899	1e-094

Arabidopsis top hits (Blast detail)	Score	e value
AT1G02090.2 FUS5 (FUSCA 5); MAP kinase kinase	1043	1e-113
AT1G02090.1 FUS5 (FUSCA 5); MAP kinase kinase	1038	4e-113
AT1G02090.3 FUS5 (FUSCA 5); MAP kinase kinase	1038	4e-113

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


9	2			100%

Unigene Members	Member information