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Information for unigene UN45113
FASTA Sequence |
Unigene ID: UN45113 | Length: 826 |
SSR | | CGTGAAACTTTTGATATATAAAGCATTTTAGCCCATCGCGTATTTCACAACTTTCCAGCGTTTATACATACACTGTTACATTACAA
CTGAATCCGGTTAAGGAACAGCACAGAGAGAGAGAGAGAGAGAGAGAGTTTATATAGAATCAAACCAATTACATGTTGATGGAGAA
TTTGTCCTAATACTCTACAGCAGAAGTGATATTATATGTATATAGAGAGGAGGCTCAGCCTGACCTCGCTGCATCAATAGCTGCAA
GTAACTCATCAAATTTAGCCCCGACCACTTCCGTTATCACCTTGCTGTCCTTCAAGATCTTAAAGGTTGGAACCACTTTAATTCCT
AGCTACTTTGCCACTGGCTTGTTGTCTTCGTTACAGTCAAGCTTAAGAAACACCATGTCCTGGTACTTCTCTGATAGCTCTTTGTA
TTTAGGAGCCATAACTTTGCAAGGTCCACACCACTGAGTGTACATGTCGAGGACAACAATCTTATCACCAGCGGCTTTAACGATTG
GCCAAAACGTGTCCTTGTCAACCTCAGTCACCTCGCCGACACTGACATTCACTGTCTCTAAGCTACACTTCACCACACGGGAACCC
ATCCTCTTCCTTAAATCTAACACACCACCACCTCCCAAACAGAATCCTGTATTCGCCGCCGCGACGCCTGAGTTCGGGATCCGGCA
GCGCTGCTTCACCGGACACAATCCTACGGAGGTGGTTGCCGGAGCCGGAGAGTAACGGAAAGATACCGGTGACGGAGCGATTCGGA
GACAGAGGGTCATAGTTGAAGAAGCTCGAATCCAAAAGCTTGTTTAGAATCC
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GenBank top hits (Blast detail) | Score | e value |
NP_197144 thioredoxin F2 [Arabidopsis thaliana] | 765 | 3e-079 |
XP_002873774 ATF2/TRXF2 [Arabidopsis lyrata subsp. lyrata] | 756 | 4e-078 |
XP_002884335 thioredoxin F-type 1 [Arabidopsis lyrata subsp. lyrata] | 626 | 5e-063 |
NP_186922 thioredoxin F1 [Arabidopsis thaliana] | 622 | 1e-062 |
AAD35003 thioredoxin f1 [Arabidopsis thaliana] | 617 | 5e-062 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9XFH9 Thioredoxin F2, chloroplastic | 769 | 5e-081 |
Q9XFH8 Thioredoxin F1, chloroplastic | 622 | 6e-064 |
O48897 Thioredoxin F-type, chloroplastic | 597 | 5e-061 |
P29450 Thioredoxin F-type, chloroplastic | 470 | 3e-046 |
O81332 Thioredoxin F-type, chloroplastic | 469 | 3e-046 |
TrEMBL top hits (Blast detail) | Score | e value |
B7FGW0 Putative uncharacterized protein | 500 | 1e-048 |
C6SZV5 Putative uncharacterized protein | 495 | 5e-048 |
B9RM61 Thioredoxin f-type, putative | 487 | 4e-047 |
C6SWF1 Putative uncharacterized protein | 484 | 9e-047 |
A9PI12 Putative uncharacterized protein | 471 | 3e-045 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT5G16400.1 ATF2; enzyme activator | 770 | 4e-082 |
AT3G02730.1 TRXF1 (THIOREDOXIN F-TYPE 1); enzyme activator | 622 | 6e-065 |
AT3G51030.1 ATTRX1; oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | 183 | 4e-014 |
AT5G39950.1 ATTRX2 (THIOREDOXIN 2); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | 168 | 2e-012 |
AT3G08710.1 ATH9 (thioredoxin H-type 9) | 163 | 9e-012 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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