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Information for unigene UN45125
| FASTA Sequence |
| Unigene ID: UN45125 | Length: 694 |
SSR | | GGATTGCCAAACCTTCATTTTCTACTTCTCTTCTTCGCCTGAGTTCACTCCTTACGTACAGACGAAATCGGACAGAGCTCGGGATA
ACACGGAGTCGTACGAATTACTTCGTCGGCCGCATGTTTCATGCAGAGAATCATAAGACGAGAAGATTCCCAGAGAGAGAGGTTCT
TTTACAACGTATGTGAGTCTCTTCTCTCTCTCTCTGTAAACCCTAACCGCAAGAACGATGCCAGGTCCCCGAAACGAGCTCTCGAT
CTCGTCTCCCCTGTCCATGGCCAATTCCCTCCTATCCTACTGATTCTGAAGCATTGCATTCCAAGGTGGACGAGGACGAGAAGAAT
CTCGTTACCAAACCCGCCGTCTTCAAGGGCGTTCTCCTTCAGCAGACTCTTCAGGCCATCGTCTCCGTTATTCTCTTCAAGAGAGC
AGAAAAGAAAAGCAGCAGTTTTAATGGAGAGGAGGACTTCAGGAGGAGTAACCAGTGCTCCTTGAGTTATCGTGAGTTTCACTTCT
TGTTCTTAGGAACCTCGTTTTTGCTCCGAAAGTTACACACCCTTTGTTGTTTAGGATGATAGGTCTGAAAACTTCAGATAAACTCT
TGAGTAGGAAATTATAAATTTCATACAGGAACAGATAAATATTGTTTCATTACATTTGCTTACAGCTTGAGAAGCATGAATCATTT
TTAAGA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002892798 hypothetical protein ARALYDRAFT_888804 [Arabidopsis lyrata subsp. lyrata] | 169 | 3e-010 |
| NP_563944 sphingoid base hydroxylase 2 [Arabidopsis thaliana] | 165 | 9e-010 |
| AAF43928 Contains similarity to acid phosphatase from Lupinus albus gb|AB023385 and contains a Sterol desaturase PF|01598 domain. EST gb|AI995340 comes from this gene [Arabidopsis thaliana] | 165 | 9e-010 |
| XP_002522423 sur2 hydroxylase/desaturase, putative [Ricinus communis] | 138 | 1e-006 |
| AAG12703 acid phosphatase, putative; 5376-6903 [Arabidopsis thaliana] | 133 | 5e-006 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9AST3 At1g14290/F14L17_4 | 165 | 6e-010 |
| Q9M9T3 F14L17.5 protein | 165 | 6e-010 |
| B9S8V4 Sur2 hydroxylase/desaturase, putative | 138 | 9e-007 |
| Q8VYI1 At1g69640/F24J1.22 | 133 | 3e-006 |
| Q9FWZ2 Acid phosphatase, putative; 5376-6903 | 133 | 3e-006 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G14290.1 SBH2 (SPHINGOID BASE HYDROXYLASE 2); catalytic/ sphingosine hydroxylase | 165 | 4e-012 |
| AT1G69640.1 SBH1 (SPHINGOID BASE HYDROXYLASE 1); catalytic/ sphingosine hydroxylase | 133 | 2e-008 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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