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Information for unigene UN45153
| FASTA Sequence |
| Unigene ID: UN45153 | Length: 823 |
SSR | | AGAGAGACCAGTTCATTATTTGATCTGTTTCAGAAATTATATCCCAACAATATGCGATTGCGTCGACCATAAAGATGGTTGAGAAC
CATAGAAGAAAAAAACCTCTTAAAAAAGCTTCTTGTATAAAGAGGGGCAGAGAGAGTAAACAATCTCCTCAATAAGCTTAATTAGC
TAATGCTTTGACAGCTTTCTCTGCAGCATCATCCAAATCATCAGCCGTTATGAGTTTCATTCCACTTTCCTTGAGGATTCTCTTCC
CCTGTTCAACGTTTGTTCCTTCTAGACGAACCACCACTGGTACTTTCAGTGACACCTCTTTAGCAGCATTCACAATTCCACTAGCA
ATCACATCACATTTCATTATTCCACCGAATATGTTCACCAATATTGCTTTCACTTTATCGTCCGACGTCAGTATCTTAAACGCCTC
CACCACCACGACCTCCTTGTTCCATAAATTTGTATGTGTAAATGTGTATAGAGTTTATAAACAGAAAAGTGTGTAGAATTTATAAT
ATTGAACAATAAACAAGGATTGTGTCTTGCGTATGTGCTAACTCGAATACGTGTTTGTGTGTTTTTCTGCTACATGTGTTTTACGG
GATTTGATTTGGGAAATTTATAGGCGGCGAGACAAATATGGGTCCTAACTAAGACCTAATATTCGAGCCCGACATATATAATGTAA
GAATATAACTCCATTGTGTTAGAATTTTCTTACGCATTGAAATTCTTCCTTTTAAATATTATTTAAATATAAAGAATTTCAATGTG
ACAAAAATATATATATATACACATAAAGAATTTCTAAGCTTCTGGATTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002884202 hypothetical protein ARALYDRAFT_480870 [Arabidopsis lyrata subsp. lyrata] | 431 | 2e-040 |
| NP_179632 Succinyl-CoA ligase [GDP-forming] subunit beta [Arabidopsis thaliana] | 423 | 2e-039 |
| BAD95156 succinyl-CoA ligase beta subunit [Arabidopsis thaliana] | 423 | 2e-039 |
| AAM65138 succinyl-CoA ligase beta subunit [Arabidopsis thaliana] | 417 | 8e-039 |
| ABA46791 succinyl-CoA ligase beta subunit-like protein [Solanum tuberosum] | 406 | 1e-037 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O82662 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial | 423 | 7e-041 |
| Q6K9N6 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial | 394 | 2e-037 |
| B6JE33 Succinyl-CoA ligase [ADP-forming] subunit beta | 321 | 5e-029 |
| Q21CW8 Succinyl-CoA ligase [ADP-forming] subunit beta | 321 | 5e-029 |
| A6UDP2 Succinyl-CoA ligase [ADP-forming] subunit beta | 318 | 1e-028 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q56Z20 AT2G20420 protein (Fragment) | 423 | 1e-039 |
| Q8LAV0 Succinyl-CoA ligase beta subunit | 417 | 5e-039 |
| Q2PYW7 Succinyl CoA ligase beta subunit-like protein | 406 | 1e-037 |
| Q3HRW0 Succinyl-CoA ligase beta subunit-like protein | 406 | 1e-037 |
| Q84LB6 Succinyl CoA ligase beta subunit | 406 | 1e-037 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G20420.1 succinyl-CoA ligase (GDP-forming) beta-chain, mitochondrial, putative / succinyl-CoA synthetase, beta chain, putative / SCS-beta, putative | 424 | 5e-042 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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