Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN45163

FASTA Sequence
Unigene ID: UN45163Length: 667 SSR 
GATTCGTATTTTTTGTTATTGTTATTTAGTGTTTGAAACAGTGCCATCAAACCTCGTGTTAATGCGATCGAGACACAACATGACCA
ATAGTTCATACATATACGATTTAAGGGATGAAAAGGAAACTTACAAATCTATATGAAGAGAATGAGGATAAAAAGAGGTTTGGTTA
AGGGGAAGAAGAGTGAAGTCGATCAAAGTGGAGAAGCTGAGATGCACATTTGGGGCAATCTTTCAAGAGTTTAGGTACCATGTAAT
AAATATAACAAGCTTTGCAACCAGCTACCACGAGAACTTCACTCTCCTCTTTGTGATTCTCTATCGATGACTCTGATGAAGATTCT
TCGCTTTCATAATAAGAGCCATCGTCTTCTGAAACAACAGTTACATCCGATTCTCCACTGAAATCATCATATACATTGTTGTTGTT
GTTGTTGTCTTCCTCCACTTTCATTCCGGTGTTCCGGTTTATGTAGTAAACCTCTCCTGTCTTGAGATCAAGACACTGTTTCAAAT
GACAAGGAACAGAGATGTGAGAATTTATCTCTAACGTTCTATCTGAGATCGGTACATCATCATCTTCGAAACTCCTTCTCCGGTTA
ATAAATGAACAATTCTGCATCATTTCCTCCAGATATTTCGATGCAGAAAGGAAGAAGAATCAACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_174128 uncharacterized protein [Arabidopsis thaliana]4964e-048
ACU23606 unknown [Glycine max]3655e-033
ACJ86077 unknown [Medicago truncatula]3469e-031
XP_002304657 predicted protein [Populus trichocarpa]3451e-030
XP_002297863 predicted protein [Populus trichocarpa]3396e-030

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9C7E6 At1g280704962e-048
C6TL16 Putative uncharacterized protein3654e-033
B7FMU4 Putative uncharacterized protein3466e-031
B9GZB4 Predicted protein3458e-031
A9PEE5 Predicted protein3394e-030

Arabidopsis top hits (Blast detail)Scoree value
AT1G28070.1 INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: protein binding (TAIR:AT2G33510.1); Has 40 Blast hits to 35 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).4971e-050
AT2G33510.1 protein binding3017e-028

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

Unigene MembersMember information