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Information for unigene UN45170

FASTA Sequence
Unigene ID: UN45170Length: 1412 SSR 
CTTTTAAATTTGTATCCATTTATATAATAACTTTATGAGTTTAGATACAAACATATTGGTGGAGAGGAACTACATATTCGTGAATA
ATTAGGTTTAGAAAACGAATCAAGGAGGGAAAAAAAGTGCTCAGAAGGTTTTAGAAAGTGGAAGAACACGAATAAGAACCGCCAGT
AGTTCTCAGCTCCGAGCACGGCCAAGGACTGACCTTAAGCGAAGTTCCAATAACATCTGAACACTTCCACGACCGGTCCGAGTTGA
AGCTTCCACGTAGGTTAATCTCACTCAAACATATCCCTGTAAATATATGTTGGCCACGTTTGTCTCCGGACAAAAGACAGTTTCAA
AAAAAAAATATATGTTGGCGGAAGTTATTTAAGATTTAATCAAGCATATATGATCGATATGGTAAAATACTAAAAAAATAATATAA
AACTTTACCTGTAAAAGGCGAACCCTTAAGGCCTTGAACGGATCCAGCGTTTCGAACGTTAACTCCCCAAACGTTACTGATATGAT
TCCTTTAACGACTGGGAGAGCGTTCGGGTTATAATTCGCGTCAGGGTGATCTCCCGTGTCGCCAGCGATCTTGATCCCGTACCTTG
CGTTTTCGACATAAACGTTGGAGATTTTAATGTTTTTGATGTATCCTCCACGACCAATGTTTGTCTTGATGTTGACTCCAACCCCC
ATATTGGAGAGACTGATGTGTTCTGCTACGACGTTCTTGATACCTACTGATGTTTCGCTTCCTATAGCGATACCAGCGAAAGGGGT
CGATCCTGTGATGCGACGGATCGTTATGTTTGAGCTTGATTAGATTCGGTCTAGTGAACTTTAGAGTTCTACTGCGCCACATGTTC
CACCACACTTCTCCTTGACCGTCTATTGTCCCGTTTTCTCCAGTGATGACTACATCACGAAGGCCATCGCCATGAATAAAACTCAT
ATACCGTGCTCCTGGTAACTCCCTCCCTCTTCCATAAGATGGCAAAGGATCAATCAATGGCCAGTTCCCTGTATCCTGAACAGCTT
TAAGGACAGCGCCTTTAGCCAAGAAGAGAGTCGTATGGCTAGTGAGATTGAAGCTCTCCGTGAGAAACACTCCCGGAGGTATGTAC
AGGAGCGTGCCTCCACTCCTCTTAAGGTGCTGTATTCTATAAATCGCTTCCCTAAAGGCTTTCGTGTTCACCGTCGTGCCGTCTCC
CACGCCGCCAAACTCTGTTATATCGATCTTATCGTTCCGGTTCGGTAACGGGACTATTCCAGAACATGTCGCCTCCGAATCACCCA
AGGACGATGAAGAGATGGACAGGAAAGTAACGGCCAGATACGAGAAGAGCAGCGTCGAAACAGAGAATCGCCACATTTTAGCTTTT
TTTGAGAGAGAGAGAATCTGCGGTGGGATTAGATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_194113 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana]8015e-083
ACC91250 glycoside hydrolase family 28 protein [Arabidopsis halleri]7981e-082
XP_002867688 glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp. lyrata]7953e-082
XP_002509949 Polygalacturonase precursor, putative [Ricinus communis]7057e-072
CBI34471 unnamed protein product [Vitis vinifera]7022e-071

Swiss-Prot top hits (Blast detail)Scoree value
A7PZL3 Probable polygalacturonase4267e-041

TrEMBL top hits (Blast detail)Scoree value
Q9SUP5 Putative polygalacturonase8014e-083
B2WS78 Glycoside hydrolase family 28 protein7988e-083
B9RCR5 Polygalacturonase, putative7055e-072
B9GXH4 Predicted protein6714e-068
C5XZF9 Putative uncharacterized protein Sb04g0093106356e-064

Arabidopsis top hits (Blast detail)Scoree value
AT4G23820.1 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein8012e-085
AT5G41870.1 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein6094e-063
AT4G33440.1 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein4794e-048
AT3G62110.1 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein4562e-045
AT3G06770.2 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein4553e-045

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

Unigene MembersMember information