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Information for unigene UN45224
| FASTA Sequence |
| Unigene ID: UN45224 | Length: 696 |
SSR | | ATTGGGGTTAATACTAATTTTGTAAAAGCTTTAAGCTACACAAAAGTTGACGCTCCCAAGGAATTCAGCATTGTATGTAAAAACAA
TCACACTTTGTCTTCTTCACACAACTTTTTTACATAACACACTAACACACACACAAGATGTTCCCAGCTTGACATTTATCTCTTAC
AAGGCAGGTGGATATGCAATGTTATTAAAGACTGTTTCACTCCTCTGAACTGCCCTCTGAACCGCTCTTCTCAAGCTCCACTCGTA
GCAGAACTCCAATGTCAGCCTTAGTGCTGTTCCTAGCCCTAGCACCACTATCACTCCAATGATTATGTTAACCGGAAGCGCAGACA
CACCAAGTGTGATGGATATTAGCACATCCAGCATTAGACCACCTATCAGAATTGAGAATGCTATGCATCTGATCCTTGCCTTCCAC
AACAAAAAGTTCCTTCTTCTCCTAGGTACCCATACAGACCTTCAACAACAAAGTCGTTTCCTTTAACTCTCTCTCTCTCTCTCTCT
CCCTCCCTTCCAGTTAACTGAAGCTAGAACAAAACTAAAGCTTTGAACATAGAAGCGCTTCCGTTTCAGATTCAATACGTATGAAA
TCGGAGGAGGAGGAGTAGAGCAGAGCACACAGATGTTGTGAATCGAAAAAAACAAAAAACAAAAGGTGTTTTTTTTTCTTCAGCCT
CTCTGTCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002880184 hypothetical protein ARALYDRAFT_483690 [Arabidopsis lyrata subsp. lyrata] | 351 | 3e-031 |
| NP_566045 RING/U-box domain-containing protein [Arabidopsis thaliana] | 346 | 1e-030 |
| AAM64995 unknown [Arabidopsis thaliana] | 346 | 1e-030 |
| XP_002317039 predicted protein [Populus trichocarpa] | 279 | 6e-023 |
| XP_002518953 ubiquitin-protein ligase, putative [Ricinus communis] | 271 | 5e-022 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O64633 At2g45530 | 346 | 7e-031 |
| Q8LB32 Putative uncharacterized protein | 346 | 7e-031 |
| A9PC07 Predicted protein | 279 | 4e-023 |
| B9RYY4 Ubiquitin-protein ligase, putative | 271 | 3e-022 |
| B9GJI5 Predicted protein (Fragment) | 259 | 8e-021 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G45530.1 zinc finger (C3HC4-type RING finger) family protein | 347 | 3e-033 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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