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Information for unigene UN45242

FASTA Sequence
Unigene ID: UN45242Length: 966 SSR 
GATAGGTCTTATTATACGGTTTCAAACATGAAGGGTTCTTGTAGAGTATACTATATGCTTCCTTCATAAGAACATTTGAGCTGTAC
CAGTAGCCTCTGATGTTTTCATTATCCGGAGTCTTTTCACAGAACCAATAAACATCCCCCAGGGAACATCACCAACAAGCATCCAA
TCTCCTTCCTTGTCTTCATACGTTAGTACTAATCCAGAAGACCCATCTGGTAGTATCTTGATGACCCGTGCTTCCAGAAACATATC
TTCGAGAGTATTGGACAGTGATTCATAGCATCTATGAGCGTTCAGATCGATTTTCCTTCCAATGGGAATACCATCCATAGTCACCT
TCACAAACATTCTCATCTTTGTAGCATCGGTTCTGTTTTTGTTTACTTCTTGACGGATCTCTTCCATTGCCAATGTCTTGGCTTGG
TTAACCATACTGTTCATTCTGTAAGTCCTTATCGGTGGCCACCCCACAACTTGACCACTAGTTGCGGCCATCGAATCAGCTGTTCT
CTTGATCCCAGCAGTCACGCTAGCTCTGCTACTCAAGGAAGAAGACGACGAAGAAGAAGAAGAAGAAGAATCAACAGCGTGAGAAA
CCCTACGTTCTCGACCTATGTTCAACGTGAGACCGAGCTCGAGCTCGAGCTCATTCTCTGCCGGAGAAGAAGAATCCTCGCAAGAG
ACGACGAGGTGTTCATCGTTTGACAAGGTCGATGCCGACATATTAGCGGAAACGCCCTCCATTGAATCAAAGATTGGAGATTTGAT
GGAAAGGGGGAAGGTGAGATGGGGAGATGGGTTGAATTTGAAGCAAAGTTTGAGACTTTTTAATAAGTAAGGGAAAAACAGTGAGA
AGGAACGAAAAATTAGGAAAAGAGGAAACAGAGGATGAACAAGACCAAGACACGACGGGTGGGATTTGTCCCTCCTTTTTTTTTTC
TTTTGCTTCCCTAACTTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869489 indoleacetic acid-induced protein 11 [Arabidopsis lyrata subsp. lyrata]6373e-064
BAJ34152 unnamed protein product [Thellungiella halophila]6355e-064
NP_194593 auxin-responsive protein IAA11 [Arabidopsis thaliana]5962e-059
NP_001078460 auxin-responsive protein IAA11 [Arabidopsis thaliana]5962e-059
NP_001190859 auxin-responsive protein IAA11 [Arabidopsis thaliana]5962e-059

Swiss-Prot top hits (Blast detail)Scoree value
Q38829 Auxin-responsive protein IAA116066e-062
Q5NB25 Auxin-responsive protein IAA33011e-026
Q75GB1 Auxin-responsive protein IAA172992e-026
A2XLV9 Auxin-responsive protein IAA132373e-019
Q10D34 Auxin-responsive protein IAA132373e-019

TrEMBL top hits (Blast detail)Scoree value
A8MR39 Uncharacterized protein At4g28640.26069e-061
B8AEV0 Putative uncharacterized protein2968e-025
D3K0F2 Indole-3-acetic acid inducible 11 (Fragment)2895e-024
C5XB42 Putative uncharacterized protein Sb02g0046702842e-023
B9SKM2 Auxin-responsive protein IAA13, putative2223e-016

Arabidopsis top hits (Blast detail)Scoree value
AT4G28640.1 IAA11 (INDOLE-3-ACETIC ACID INDUCIBLE 11); transcription factor6065e-063
AT4G28640.2 IAA11 (INDOLE-3-ACETIC ACID INDUCIBLE 11); transcription factor6065e-063
AT1G04240.1 SHY2 (SHORT HYPOCOTYL 2); transcription factor2373e-020
AT3G15540.1 IAA19 (INDOLE-3-ACETIC ACID INDUCIBLE 19); transcription factor2364e-020
AT5G43700.1 ATAUX2-11 (AUXIN INDUCIBLE 2-11); DNA binding / transcription factor2347e-020

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

Unigene MembersMember information