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Information for unigene UN45259

FASTA Sequence
Unigene ID: UN45259Length: 764 SSR 
GGGGAATCTCGGCCTTCTTTTCAGTGTTCTTCACAGCATCATTCTTGAGAACAGCCAAGACCTCATCTGCAGCACCACTAACAATA
TTCAGAGGCAACCCACCCAGCTGCTGCTGAATCAGACTAAGCATAGCCTCGTAAGCAGCCCTCGTCTCCTTAGTCTTGGGCTGATA
AACCACATCGTCAGTATCCGTGGGCACACTCTCTTCCCTGAGCCGACGCCTCTTGCTCTGCCGAGCAGAAACAGTATCATCCGCAA
CAACATCACGCTCCTTCTTCTTCTTAGACTTGTTAAGCTTATCCTCCAGCTCCTGAGGTCTTCCCTTAGCAACTCTATCTCCAAAG
GACTTGGGATCAATCTTCCCCCACAGAGTCTCAGGTTCTCCGGTAGGCTCGTGTGTATCGCGAGGACGGTTCTCACTGGTTAGCAC
CAAGCTAGAGTTGGCTCTGTACTCGTACTGCTTGAATCTGGCATGAGCTTCTGCGCCGCCTCCCAAGTTCGCCATCACTGAAACTC
TAAGATTCGAAATTAAACAATGTTAAAACCACAAATCGAATCTAATCAGCGACGAGATTTAAACCTAATAACCGCCACGAAACGAA
GCAGAGAGAGAGAGAGAGAGAGAGAGAGAATGTACTTACGGAAACAACTCGAATCTTCTCTGCAGAGAGTGAAGCTTCGTGTAGAT
TTAGGGTTTCTTCGTTCTCCGGCTGCGAATCCTTTACCTAATTGTCGAATTAACGGAAATCAAACAATGTTAAACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002893142 EMB1507 [Arabidopsis lyrata subsp. lyrata]7384e-076
NP_173520 putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana]7242e-074
CAN75158 hypothetical protein VITISV_042645 [Vitis vinifera]6533e-066
XP_002266580 PREDICTED: hypothetical protein [Vitis vinifera]6533e-066
CBI36671 unnamed protein product [Vitis vinifera]6533e-066

Swiss-Prot top hits (Blast detail)Scoree value
Q9VUV9 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase2856e-025
O75643 U5 small nuclear ribonucleoprotein 200 kDa helicase2793e-024
Q55CI8 Activating signal cointegrator 1 complex subunit 3-like1673e-011
Q9U2G0 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase1512e-009

TrEMBL top hits (Blast detail)Scoree value
Q9SYP1 F9H16.5 protein7241e-074
A5BZG5 Putative uncharacterized protein6532e-066
B9IFA9 Predicted protein6488e-066
B9I3Q9 Predicted protein6192e-062
A2WZV9 Putative uncharacterized protein5922e-059

Arabidopsis top hits (Blast detail)Scoree value
AT1G20960.1 emb1507 (embryo defective 1507); ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding / nucleoside-triphosphatase/ nucleotide binding7247e-077
AT2G42270.1 U5 small nuclear ribonucleoprotein helicase, putative5851e-060

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

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