Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN45288

FASTA Sequence
Unigene ID: UN45288Length: 577 SSR 
GGGCTCTCAGAGTTTAAACCCTAGAAGAATCCAGCCACAATGATGTCGTTATTTTGTGGAGCATCGTCTACAATGGCCACTCTTTC
CTTCCGTGCGGTTAGATTTCCGATGAGTTTCCAAACTGGTGCCCATAGAGTGACTCTTGGTGGTGGTAGCCATCAGTTCAGCAGCG
CATCGTTGATTTCATTCTCGAGGGTTTCCACGCTCAGTGCTATCACCACCAAAACAGCCGACGACGAGAATCTAATTAGCGTCCTC
GATTCTGAAATCGAATACGCCGATTTCGAAGAGGCTCCCGACTTGCCAGAAGGGTTTCCTTTCCGAATCATTGATACTCCAGGGAA
ACAAACTCTGTATCTGACCAGGAAGTTTGAGGATGAAACTATCCTTGTCCAAGTTTACCCTATCGATTATGAAGAAGAAGAAGAAG
AAGAAGAAGAAGAAGAAGAACCAAGCGATTCTGATGAAGATGAAGAACATATCGGGACTCCTAGGGTTATCAATTTGTTGAAAGAT
AATCATGTGTCTCTTAAGTACGCCGATAAGTTTGAGATTAATATATTCATCCAACAACCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_195825 Mitochondrial glycoprotein family protein [Arabidopsis thaliana]3466e-031
AAM64272 unknown [Arabidopsis thaliana]3431e-030
XP_002873035 mitochondrial glycoprotein family protein [Arabidopsis lyrata subsp. lyrata]3385e-030
XP_002308182 predicted protein [Populus trichocarpa]1782e-011
XP_002322920 predicted protein [Populus trichocarpa]1737e-011

Swiss-Prot top hits (Blast detail)Scoree value
Q8W487 Uncharacterized protein At2g39795, mitochondrial1332e-007

TrEMBL top hits (Blast detail)Scoree value
Q9LZM6 At5g020503464e-031
Q8LD55 Putative uncharacterized protein3431e-030
B9HC44 Predicted protein1781e-011
B9IFX9 Predicted protein1735e-011
B9SE10 Putative uncharacterized protein1718e-011

Arabidopsis top hits (Blast detail)Scoree value
AT5G02050.1 mitochondrial glycoprotein family protein / MAM33 family protein3463e-033
AT5G05990.1 mitochondrial glycoprotein family protein / MAM33 family protein1627e-012
AT2G39795.1 mitochondrial glycoprotein family protein / MAM33 family protein1332e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information