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Information for unigene UN45388

FASTA Sequence
Unigene ID: UN45388Length: 765 SSR 
GGGTTAATCATCTTCTTCGTCTTCCGCCAGCGCTCCTCTCTCTAATCGAATTGAAGTTGTTTTAAGCAAGGGGAGGGAAGAAAATG
GTTTCTGGATTAATCAACGAGAACCCGATCGTGTACGAGGTAAAACATCGTCGTGATGTTCGTGCCGATTCCAGCAGCAGTACCAA
TGAGCTCTCAGCAGATTCAATCGATCATCTCGAAGTTTTCGATCATATAAGAGATATAAAAGATCCAGAGCATCCTTACTCTCTGG
AACAACTCAAAGTCCTTACAGAAGACTCTGTTGAAGTTGATGATACCAAGAGTCATGTTAGGGTTACGTTCACTCCAACGGTGGAA
CATTGTAGCATGGCAACTATTATTGGTCTCTGTGTCCGTGTGAAGCTTATGCGAAGCCTTCCTCGTCGTTACAAGATTGATATAAG
GGTAGCCCCCGGTACTCATGCAACTGAGGCTGCAGTCAATAAACAACTAAACGACAAAGAGCGTGTGGCGGCTGCACTAGAGAATC
CGAACCTTGTGGAGATGGTCGATGAATGTCTATCTTCATCACTTGAATGATGCCCTTGATGCTCTCAAGATACACTTTCATATATA
TATATGTCTCTGCTTTGTCTGCAAATATTTTGATCAGCTAGGGCTTACTTTGTGTTTAGTGTCATGTTTAATGAATGTATTTGATT
TGATCCACTATGATTATTTCAGATACTCTCCAACCGAACTTGTTGCACGCTTGTCTTTCACACATTTGTTCCGTTGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002303444 predicted protein [Populus trichocarpa]6417e-065
NP_001154457 uncharacterized protein [Arabidopsis thaliana]6202e-062
ACF80547 unknown [Zea mays]6076e-061
NP_001053732 Os04g0595200 [Oryza sativa Japonica Group]6068e-061
XP_002276610 PREDICTED: hypothetical protein [Vitis vinifera]6068e-061

Swiss-Prot top hits (Blast detail)Scoree value
Q9C9G6 UPF0195 protein At1g683106298e-065
Q9Y3D0 Protein FAM96B4415e-043
Q9D187 Protein FAM96B4407e-043
Q9VTC4 UPF0195 protein CG79494147e-040
O62252 UPF0195 protein F45G2.103985e-038

TrEMBL top hits (Blast detail)Scoree value
B9GZK5 Predicted protein6415e-065
B4FEK4 Putative uncharacterized protein6074e-061
Q0JAJ1 Os04g0595200 protein6066e-061
C5YF34 Putative uncharacterized protein Sb06g0272506057e-061
B6TN69 Putative uncharacterized protein6041e-060

Arabidopsis top hits (Blast detail)Scoree value
AT1G68310.2 vacuolar sorting signal binding6298e-066
AT1G68310.1 vacuolar sorting signal binding5921e-061
AT3G50845.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF59 (InterPro:IPR002744); BEST Arabidopsis thaliana protein match is: vacuolar sorting signal binding (TAIR:AT1G68310.2); Has 415 Blast hits to 414 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 216; Fungi - 86; Plants - 41; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink).4551e-045
AT3G09380.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF59 (InterPro:IPR002744); BEST Arabidopsis thaliana protein match is: vacuolar sorting signal binding (TAIR:AT1G68310.2); Has 408 Blast hits to 408 proteins in 151 species: Archae - 0; Bacteria - 0; Metazoa - 214; Fungi - 85; Plants - 40; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink).3913e-038

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information