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Information for unigene UN45398

FASTA Sequence
Unigene ID: UN45398Length: 801 SSR 
GGAAGTTGAATGAAATAAAGAAGTTAAAGTTTTATCTTGTTCTATCTCTTCTTCTCTGTCTTTAAGTTTTACCAACTAAGCCACAG
CTCATCACTAAAGCATTTTTCTCATCCATATAAGTCACATAACTTCCAACCTCACTTTCCCATCCACGCATAAACTCAAACTTCAA
AACACAATGGCAACCATTCGTCTAGCGCTAGCTCCTCTCCTCCTCCTCCTCCTCACCGCCATATTCCTCTCCACGGAGGTAACTGC
TCAGCCCGCCGCTCCTGCTCCTGGCCCTGCCGGTCCCATCAACATTACACCTATCCTAGAAAAAGGCGGTCAGTTTGTTACTTTCA
TCCGTCTTCTAAACACAACTCAAATCGGAAACCAAGTGAACGTGTCGACAGGTGTTATCGAGACACGTGTCAGTAATGCATTAAGA
AAAGAACGTCCACTTGCGGTTTACGTGGTGGACATGGTATTGTTGCCTGAAGAGATGTTTGGAGACCGCAAGAAGATCTCATCGGT
GGCGCCTGCTCCAAAATCCAAATCTCCTGCTGTCTCTGATGACTCATCAGACGACTCCTCTAAGAAAGCGGCGGTTCCGTCCCAGA
AGTCTGGCTCCGGTGAGATGAAGGCTGGATTAGGCTTTGGTCTTGGATTTATTCTCTTATGTTTAAAATTCATTGTTTAATTGTGC
TGCTTTATTTTTTTTATTTAATTGTGTGGGTTGTGTAATAAGAAACTTGTGTATTGAATATATGATGTATCATGCTGCATGGATTG
AAAACTGAAATAAGATTTTTTTTTAGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002865383 hypothetical protein ARALYDRAFT_494579 [Arabidopsis lyrata subsp. lyrata]3901e-035
NP_199226 fasciclin-like arabinogalactan protein 13 [Arabidopsis thaliana]3836e-035
XP_002892185 hypothetical protein ARALYDRAFT_470362 [Arabidopsis lyrata subsp. lyrata]3693e-033
NP_563692 fasciclin-like arabinogalactan protein 9 [Arabidopsis thaliana]3631e-032
AAN60339 unknown [Arabidopsis thaliana]3631e-032

Swiss-Prot top hits (Blast detail)Scoree value
Q9FFH6 Fasciclin-like arabinogalactan protein 133833e-036
Q9ZWA8 Fasciclin-like arabinogalactan protein 93654e-034
Q9SIL7 Fasciclin-like arabinogalactan protein 62202e-017
Q8LEJ6 Fasciclin-like arabinogalactan protein 111656e-011
Q8LEE9 Fasciclin-like arabinogalactan protein 121477e-009

TrEMBL top hits (Blast detail)Scoree value
B3LF88 At1g038703639e-033
A0T2P3 Putative uncharacterized protein3531e-031
B1NHU5 Fasciclin-like arabinogalactan protein 12204e-016
A9XTK9 Fasciclin-like arabinogalactan protein 42186e-016
A5BN83 Putative uncharacterized protein2178e-016

Arabidopsis top hits (Blast detail)Scoree value
AT5G44130.1 FLA13 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 13 PRECURSOR)3842e-037
AT1G03870.1 FLA9 (FASCICLIN-LIKE ARABINOOGALACTAN 9)3653e-035
AT2G20520.1 FLA6 (FASCICLIN-LIKE ARABINOGALACTAN 6)2202e-018
AT5G03170.1 FLA111655e-012
AT5G60490.1 FLA121476e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

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