 |
Information for unigene UN45421
| FASTA Sequence |
| Unigene ID: UN45421 | Length: 446 |
SSR | | TTTTTGAGAATCCTATATGACACGTCATCATTTCCCAAAACCTTTGATCCAAAAACTACTACTAATCACTCTGTTTTAACACTTGA
CTACTGTACTTGTCATTATCTCTCTCTCTCTTAAGTCTTAACTGATCAGATCCGTACAGAGAAGGATGATGAGGCAGTTGGTGAAG
AGAGTGGTCAATAGAGCTTCAGCTTCCTCCAGCCCTGCCATCTCCATCCTCCGCTCTGATTTCTCCACCTCTTCTTCATCTACGCC
GCAGATTCCGCCGTTCGATTACGAGGCGCGGCCGTATAATGGTCCCTCCGCCGAAGAAGTTTTCGAGAAACGGAAGAAGTTTCTGG
GACCTTCTCTTTTCCATTTCTACCAAAAGCCTGTATGTTATGTTATATGCTGGATTCAATCATCGAATATGTTTGAAATTAAGAAC
TCTCTCGTTTGCAGCT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002866874 hypothetical protein ARALYDRAFT_490746 [Arabidopsis lyrata subsp. lyrata] | 245 | 1e-019 |
| NP_568064 alanine:glyoxylate aminotransferase 2 [Arabidopsis thaliana] | 223 | 5e-017 |
| AAD48837 alanine:glyoxylate aminotransferase 2 homolog [Arabidopsis thaliana] | 223 | 5e-017 |
| CAA18752 putative protein [Arabidopsis thaliana] | 223 | 5e-017 |
| ACJ85589 unknown [Medicago truncatula] | 204 | 7e-015 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q940M2 Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial | 223 | 3e-018 |
| Q9SR86 Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial | 142 | 8e-009 |
| Q94AL9 Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial | 130 | 2e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WUN0 Alanine:glyoxylate aminotransferase 2 homolog | 223 | 3e-017 |
| B7FLF5 Putative uncharacterized protein | 204 | 5e-015 |
| B9HFU8 Predicted protein | 197 | 3e-014 |
| C6TGR7 Putative uncharacterized protein | 193 | 9e-014 |
| B5LAW1 Putative aminotransferase | 174 | 1e-011 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G39660.1 AGT2 (ALANINE:GLYOXYLATE AMINOTRANSFERASE 2); alanine-glyoxylate transaminase/ catalytic/ pyridoxal phosphate binding / transaminase | 223 | 3e-019 |
| AT3G08860.1 alanine--glyoxylate aminotransferase, putative / beta-alanine-pyruvate aminotransferase, putative / AGT, putative | 142 | 8e-010 |
| AT2G38400.1 AGT3 (ALANINE:GLYOXYLATE AMINOTRANSFERASE 3); alanine-glyoxylate transaminase/ catalytic/ pyridoxal phosphate binding / transaminase | 130 | 2e-008 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
