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Information for unigene UN45423

FASTA Sequence
Unigene ID: UN45423Length: 829 SSR 
GGGAGAAAAGCAAAAGGTTGTGTTCTGTCTCGCTACAAAGAGTTGCCAAGACCGTTGATACTTATTTAGCGGAGATCGCTACTTGC
TTGGAGCTCACGGTATCCAAGTTCAACGCGATAGCAAACCTTGTTCCGAAGTCCGCTAGAAAGTCAGAAGACGATCTCTACAGAGC
GACAGACATCTTCTTGAAAGCTCATCCGAACCTAGACGAGATGGAAAGAGAGAAAGTTTGTAGCTCAATGGACCCTCTCAAGCTTT
CTTGCGACGCACGTCTCCATGCTTCGCAGAACAAGAGGTTACCGGTAAACATCGTTCTTCACGCGCTTTACCACGATCAGCTAAAG
CTAAGAAGCGGGGTTGAAGATAAAGAAGGAGAAGTAGTTATAGTCCCTGAGGCTTTAGCGACACGTGGACAGGCTAAAGCTGACAC
TACGTTGGCTAAAGAGAACGAAGCTTTGAGGAGTGAGCTGATGAAGATGAAGATGTATGTTTCTGATCTACAGAAGAGTGGTGGTG
GAGCTTCTTCTTCTTCGAATGCAACGGCGTTGGTAAGTAATAAGAACAGCAAACATACTTTCTTCTCATCTGTTTCGAAGAAGCTT
GGGAAGTTGAATCCGTTTAGACATGAGTCTAAGGATACTTCTAACATTGATGAGGATCTTGATGGTGTTGATATTACTAGGCCAAG
AAGACGAAGATTCTCAATCTCCTAAGTTAAGGAAACGTTTGATCTTTTAAGTTTGTGTGTGTGTGTTTGTGTATAAATTTCTTAGT
CCAGTGTGCTCTCTTTTGTTTGCCTTTGATGCGTGATTTCATAAAAGAAGTTTGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ33924 unnamed protein product [Thellungiella halophila]9832e-104
XP_002881117 hypothetical protein ARALYDRAFT_481966 [Arabidopsis lyrata subsp. lyrata]9572e-101
NP_850147 Root phototropism protein 2 [Arabidopsis thaliana]9501e-100
NP_001031446 Root phototropism protein 2 [Arabidopsis thaliana]9501e-100
AAB63086 unknown protein [Arabidopsis thaliana]9501e-100

Swiss-Prot top hits (Blast detail)Scoree value
Q682S0 Root phototropism protein 29506e-102
Q9FKB6 BTB/POZ domain-containing protein At5g488003011e-026
Q9FMF5 Root phototropism protein 32722e-023
Q5KS50 Coleoptile phototropism protein 12642e-022
Q9S9Q9 BTB/POZ domain-containing protein At1g304402614e-022

TrEMBL top hits (Blast detail)Scoree value
Q0WKX4 Putative uncharacterized protein At2g305109508e-101
Q0WL22 Putative uncharacterized protein At2g305109508e-101
Q0WLR7 Putative uncharacterized protein At2g305109508e-101
Q2V443 Putative uncharacterized protein At2g30520.29508e-101
B9INK2 Predicted protein7366e-076

Arabidopsis top hits (Blast detail)Scoree value
AT2G30520.1 RPT2 (ROOT PHOTOTROPISM 2); protein binding9514e-103
AT2G30520.2 RPT2 (ROOT PHOTOTROPISM 2); protein binding9514e-103
AT2G30520.3 RPT2 (ROOT PHOTOTROPISM 2); protein binding9514e-103
AT5G67385.1 protein binding / signal transducer3332e-031
AT3G08660.1 phototropic-responsive protein, putative3261e-030

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information