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Information for unigene UN45438

FASTA Sequence
Unigene ID: UN45438Length: 690 SSR 
GGGCCGGCAAGGTAGAGAGAGAGAGACGACGCCATGGTTAAGTTTCTGAAGCAGAACAAAGCTGTGATCCTCCTCCAAGGTCGTTA
TGCCGGCAAGAAGGCAGTGATCATCCGTTCATTCGACGACGGCAACCGCGAGCGTCCCTACGGACACTGTCTCGTCGCCGGGCTCA
GGAAGTATCCGAGCAAGGTCATCCGCAAGGACTCGGCCAAGAAGACGGCGAAGAAGTCGAGAGTCAAGTGTTTCATCAAGGTCGTT
AACTACCAGCATCTGATGCCTACTCGTTACACGTTGGACGTGGATCTGAAGGAGGTTGCGACTCTCGAGGCTCTGTCTTCGAAGGA
TAAGAAGGTGGCGGCTCTTAAGGAAGCTAAGGCTAAGCTCGAGGAGAGGTTCAAGACCGGTAAGAACAGGTGGTTCTTCACCAAGC
TCAGGTTCTGAGAAATGAGGTTTTCTTTTTTATCTTTTGTAATGGAATTTACGGATTACTTTTGTAGTTCTAAAATGGTGATGTGG
ATCGTGTTTTTGGATGTGTTTAAGACTTGTTTGTTTGAAAGATTTTGCCTTTTTTTTTTATCATTTATCATCATTTGCTTAGCTTG
AATTCTCAAGATTTACTTACAGTGCCAGATTAGTAGTGAAATGTGCTTGTCTGAATTTATGTTTCATTGCCCACTGTTATGAATCA
AA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_193236 60S ribosomal protein L27-3 [Arabidopsis thaliana]6684e-068
XP_002870267 60S ribosomal protein L27 [Arabidopsis lyrata subsp. lyrata]6542e-066
NP_188862 60S ribosomal protein L27-2 [Arabidopsis thaliana]6433e-065
AAM63601 ribosomal protein L27, putative [Arabidopsis thaliana]6424e-065
XP_002300063 predicted protein [Populus trichocarpa]6059e-061

Swiss-Prot top hits (Blast detail)Scoree value
P51419 60S ribosomal protein L27-36682e-069
Q8LCL3 60S ribosomal protein L27-26432e-066
Q05462 60S ribosomal protein L275884e-060
Q9SKX8 60S ribosomal protein L27-15875e-060
P41101 60S ribosomal protein L275132e-051

TrEMBL top hits (Blast detail)Scoree value
Q0WRB8 60S ribosomal protein L276683e-068
A9P8D7 60S ribosomal protein L276056e-061
A9PAT1 60S ribosomal protein L276031e-060
A8MS28 Uncharacterized protein At4g15000.25984e-060
B7FH51 60S ribosomal protein L275975e-060

Arabidopsis top hits (Blast detail)Scoree value
AT4G15000.1 60S ribosomal protein L27 (RPL27C)6691e-070
AT3G22230.1 60S ribosomal protein L27 (RPL27B)6441e-067
AT4G15000.2 60S ribosomal protein L27 (RPL27C)5983e-062
AT2G32220.1 60S ribosomal protein L27 (RPL27A)5884e-061

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information