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Information for unigene UN45496

FASTA Sequence
Unigene ID: UN45496Length: 656 SSR 
GGATTCAGCCGCAAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACCCTCGAGGTCGAATCTTCCGACACCATCG
ACAATGTCAAAGCCAAGATCCAGGACAAGGAAGGAATCCCACCGGACCAGCAACGACTGATCTTCGCCGGGAAACAGCTAGAAGAC
GGCCGCACCCTCGCAGACTACAACATCCAGAAGGAGTCGACGCTTCATCTCGTCCTCCGTCTCCGCGGTGGTGCGAAGAAGAGGAA
GAAGAAGACGTACACCAAGCCCAAGAAGATCAAGCACAAGCACAAGAAGGTGAAGCTCGCCGTCCTCCAGTTCTACAAGGTTGATG
GATCTGGTAAAGTGCAGAGGCTGAGGAAGGAGTGTCCTAACGCGACGTGCGGTGCTGGGACGTTCATGGCGAGTCATTTCGATCGT
CATTACTGTGGTAAGTGTGGTCTTACTTACGTTTACCAGAAAGAAGGAGCTGAGGCATGATCTCTCTCTCTCTCTCGCTGTCACTT
TTCTCTATCTTTAATTTCGCTTTTGTAATGGATTCAATGCTGAACCTGTTTTGTTCTGGATTTCTTATCTAGATTGATGAGTTTTA
TTAAGGTGTTTATTCATGTTGGTCCTTTTGATTAGTCTTAATTACATTTCTTGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_191784 ubiquitin-40S ribosomal protein S27a-3 [Arabidopsis thaliana]8153e-085
NP_566095 ubiquitin-40S ribosomal protein S27a-2 [Arabidopsis thaliana]8136e-085
XP_002876668 hypothetical protein ARALYDRAFT_486730 [Arabidopsis lyrata subsp. lyrata]8082e-084
ABK42077 ubiquitin extension protein [Capsicum annuum]7876e-082
AAQ76040 ubiquitin extension protein [Cucumis sativus]7822e-081

Swiss-Prot top hits (Blast detail)Scoree value
P59233 40S ribosomal protein S27a-34361e-042
P59232 40S ribosomal protein S27a-24343e-042
P47905 40S ribosomal protein S27a3931e-037
P62980 40S ribosomal protein S27a3912e-037
P62981 40S ribosomal protein S27a3912e-037

TrEMBL top hits (Blast detail)Scoree value
A0MKC8 Ubiquitin extension protein7874e-082
Q6UCJ3 Ubiquitin extension protein7822e-081
A5AGV0 Putative uncharacterized protein7812e-081
Q06H21 Ubiquitin/ribosomal protein S27a7812e-081
A9P863 Predicted protein7785e-081

Arabidopsis top hits (Blast detail)Scoree value
AT3G62250.1 UBQ5 (ubiquitin 5); protein binding / structural constituent of ribosome8161e-087
AT2G47110.1 UBQ6; protein binding8133e-087
AT1G23410.1 ubiquitin extension protein, putative / 40S ribosomal protein S27A (RPS27aA)7587e-081
AT1G31340.1 RUB1 (RELATED TO UBIQUITIN 1); protein binding3804e-037
AT2G35635.1 UBQ7; protein binding3804e-037

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information