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Information for unigene UN45516
| FASTA Sequence |
| Unigene ID: UN45516 | Length: 898 |
SSR | | GATATCCCTTAATTAGAGATCCGGAAGTTCCTTTGTGAGAGAAGATGACAGTGATCGACATTCTGACCAGAGTTGACACGATCTGC
AAGAAGTACGACAAGTACGACGTCGACAAACAGCGCGAGTCCAACATCTCCGGCGATGACGCTTTCGCTCGTCTCTACGGAGCTTT
CGAGACCCAAATCGAGACAGCTCTCGAGAAAGCTGAGATTGTTACCAAGGAGAAGAACAGAGCTTCTGCTGTTGCGATGAACGCTG
AGATCCGTCGCACAAAGGCTAGATTGTCTGAGGAAGTTCCCAAGCTGCAGAGACTTGCTCTCAAGCGGGTAAAGGGCCTTACAACG
GAAGAGCTTGCTGCGAGAAACGATTTGGTGCTTGCGCTTCCGGCGAGGATCGAAGCTATACCTGATGGGACAGCGGGTGGTCCTAA
AAGCACTACTAGTGCTTGGGCTCCTTCTACAACCTCTCGTCCTGATATCAAGTTTGATTCAGATGGGCGTTTTGATGATGATTACT
TTCAAAGGTGGACAGAGCAACCTCGGATCTTAAGAACACCAATGTTAGACTCAAAGATACTGTGAACCAGCTGAGATCAAGCAGGA
ACTTCTGCATCGATATTGTTCTGTTGTGTATCGTTCTGGGTATCGCTGCATACTTGTACAATGTACTGAAGTGATGAGATGAACAG
GAAAGGGACCCATCACTACTCTCTATTGCCATTATCTATTAAAGTTTCTTACCCGACTCAGTGTGTGCTTGTTTCTGTCTGTATTC
GTGTGATCTTTCTACAAGAGTTTCTTCTGAAGTGTTAAGACTGCTCAAGTTGTTTCCTATATTGAGTTTTTTCCATGTTGTTCATG
TCCATTACATGATGAATATATATATATACTCCTTCCCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_566354 syntaxin-71 [Arabidopsis thaliana] | 752 | 1e-077 |
| XP_002882636 hypothetical protein ARALYDRAFT_897138 [Arabidopsis lyrata subsp. lyrata] | 743 | 1e-076 |
| XP_002280272 PREDICTED: hypothetical protein [Vitis vinifera] | 599 | 7e-060 |
| XP_002519551 syntaxin, putative [Ricinus communis] | 591 | 6e-059 |
| ACU21539 unknown [Glycine max] | 574 | 6e-057 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2HIU8 At3g09740 | 752 | 9e-078 |
| B9S0N2 Syntaxin, putative | 591 | 4e-059 |
| C6TI87 Putative uncharacterized protein (Fragment) | 574 | 4e-057 |
| B9IJ24 Predicted protein | 573 | 5e-057 |
| C6T6L8 Putative uncharacterized protein | 555 | 6e-055 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G09740.1 SYP71 (SYNTAXIN OF PLANTS 71); protein transporter | 752 | 5e-080 |
| AT3G45280.1 SYP72 (SYNTAXIN OF PLANTS 72); protein transporter | 469 | 3e-047 |
| AT3G61450.1 SYP73 (SYNTAXIN OF PLANTS 73); protein transporter | 459 | 5e-046 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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