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Information for unigene UN45531
| FASTA Sequence |
| Unigene ID: UN45531 | Length: 837 |
SSR | | GGGCTGATTTCCTCTGAAAATTCACCTTTCAATGGCTTCTTCTTCTTCTTCACTATCGTCTCTCTCTCTCCCACTGATGAAATCCC
CCACAAAGTCGGGTCTTTCCACAAGAACGATCCCAGCATCGGTACGGGACTCGTCGGAGCTCCAGCCTGCGGTGATGTGATGAAGC
TTCAGATCAAGGTCGACGAGAATACCCGTCAGATCGTTGATGCTCGCTTCAAGACCTTTGGTTGTGGCTCCGCTATCGTCTCTTCA
TCTGTTGGTATGTTTCCATCTGTAACGGATTCGAGATTCGAATTTCAGTTGGGGATTTTGATTTACTTGTTCTGAAATTGATGAAT
TAGGTCTTAAATTGATTGTTTTTTTATTAATTAGGTTTCAGATTGATTGGTTCACTGTGGAGGTGGTGTTCGAATTGATTGGTTCT
TGATGATTTATGTTTGATATTAATCGGTTCTTGTTCATTGGGAAGTATATCCAAGTGCCACCTTCGTTGAATTACCTTTTGGTGAC
TACGACATTGCTTGTAGGTGCTGCTGGCGCTGGTGCTTCAGTTCTTGGAATGATAGCAGCTTCCATCATCATAGTAGGCTTGTAAA
ACTTGCTGCAGCCAGTTGATATAGTTTTATATCAACAGGAGTTGGATGAGATGAAGAAGCGACTGAAAGAGATTGAGGATGAAGCT
GCTGCTCTTCGTGAGATGCAGGCCAAGGTTAAGAGGGATACGGGACTTCACGGTTTGTTCTGATTTTAAAGCTATGATCTTTAATG
AAACCATCAATTAAGCATTAATCATGTTTTTCATTTCCTTGTTTTTAATGAAAGTGTATTCAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAM66114 nifU-like protein [Arabidopsis thaliana] | 277 | 1e-022 |
| XP_002867782 iron-sulfur cluster assembly complex protein [Arabidopsis lyrata subsp. lyrata] | 276 | 2e-022 |
| NP_193953 SufE/NifU family protein [Arabidopsis thaliana] | 270 | 9e-022 |
| XP_002511390 nitrogen fixation protein nifu, putative [Ricinus communis] | 267 | 2e-021 |
| ACI47519 iron-sulfer cluster scaffold protein ISU1 [Eucalyptus grandis] | 266 | 3e-021 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9H1K1 Iron-sulfur cluster assembly enzyme ISCU, mitochondrial | 219 | 3e-017 |
| Q9D7P6 Iron-sulfur cluster assembly enzyme ISCU, mitochondrial | 219 | 3e-017 |
| Q6CFQ0 Iron sulfur cluster assembly protein 1, mitochondrial | 216 | 7e-017 |
| Q03020 Iron sulfur cluster assembly protein 1, mitochondrial | 214 | 1e-016 |
| Q6FJY3 Iron sulfur cluster assembly protein 1, mitochondrial | 213 | 2e-016 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8L984 NifU-like protein | 277 | 1e-022 |
| O49627 AT4g22220/T10I14_50 | 270 | 6e-022 |
| B9RB15 Nitrogen fixation protein nifu, putative | 267 | 1e-021 |
| B8R1J5 Iron-sulfer cluster scaffold protein ISU1 | 266 | 2e-021 |
| C6T2J7 Putative uncharacterized protein | 266 | 2e-021 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G22220.1 ISU1; structural molecule | 270 | 4e-024 |
| AT3G01020.1 ISU2 (ISCU-LIKE 2); structural molecule | 239 | 1e-020 |
| AT4G04080.1 ISU3 (ISCU-LIKE 3); structural molecule | 231 | 1e-019 |
| AT5G13390.1 NEF1 (NO EXINE FORMATION 1) | 161 | 2e-011 |
| AT5G65260.1 polyadenylate-binding protein family protein / PABP family protein | 131 | 5e-008 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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