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Information for unigene UN45568

FASTA Sequence
Unigene ID: UN45568Length: 633 SSR 
GCTCTACTTGTCTAACAATAAGCTCTCAGGTAACCGATATTTTTTAGTTTCCTAATTATAACTTTCGGTTAAAATGTTGGACCTAC
AAAACGGATCGATTAAAGGGATGTAACCACTAAATTATTATTATTATTGAAAATTTAATAAATCATAGTATTCAATAACGTTGCCC
TGACAGGAAAAATACCGGAGTCGTTGTCAAAGAACGACTTTAACGGAGTATTTCTGTCGAAAAACAGATTCACAGGAGATGGTTCG
ATGTTTTTCGGACGGAACAAAACAACAATATCAATGGATCTATCGAGGAATTTGTTTGAATTCGATCTCTCCAAGGTTAAGTTCGC
TAGGAGCATAGTTGATTTGGATTTGAGCCATAACCGAATCTTCGGGAACCTTCCTAGGGAACTGATCGAGCTACGCGATCCCAAGC
TTTTCAACGTTAGTTACAATCGTCTCTGCGGAAAAGTCCCACGTGGTGGTCTCCTTCAGACCTTCAAATCATATGAGTTCGCTCAC
AACCGCTGTCTTTGTGGAACTCCTCTCAAGGCTTGTTAAATGGTCTGAGAACAAATAATTATGTCTTTATCTGTATGATGATGATC
AGGTGTTAATTTCAGTCAAATGAATTGTTGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884888 predicted protein [Arabidopsis lyrata subsp. lyrata]5053e-049
XP_002886201 predicted protein [Arabidopsis lyrata subsp. lyrata]4911e-047
BAB01963 leucine-rich repeat protein; polygalacturonase inhibitor-like protein [Arabidopsis thaliana]4856e-047
AAY82490 polygalacturonase inhibiting protein [Ulmus pumila]4041e-037
ABV04088 polygalacturonase-inhibiting protein [Fragaria x ananassa]3933e-036

Swiss-Prot top hits (Blast detail)Scoree value
Q9M5J9 Polygalacturonase inhibitor 13761e-035
Q05091 Polygalacturonase inhibitor3715e-035
Q9M5J8 Polygalacturonase inhibitor 23553e-033
A7PW81 Polygalacturonase inhibitor3553e-033
P58823 Polygalacturonase inhibitor 33034e-027

TrEMBL top hits (Blast detail)Scoree value
D0EWF2 Polygalacturonase inhibitory protein5007e-049
Q9LH53 Leucine-rich repeat protein; polygalacturonase inhibitor-like protein4854e-047
Q4PJV6 Polygalacturonase inhibiting protein (Fragment)4041e-037
A7Y2Y8 Polygalacturonase-inhibiting protein3932e-036
Q8W3U5 Polygalacturonase-inhibitor protein3896e-036

Arabidopsis top hits (Blast detail)Scoree value
AT3G12145.1 FLR1; enzyme inhibitor/ transcription factor binding4423e-044
AT5G06860.1 PGIP1 (POLYGALACTURONASE INHIBITING PROTEIN 1); protein binding3761e-036
AT5G06870.1 PGIP2 (POLYGALACTURONASE INHIBITING PROTEIN 2); protein binding3553e-034
AT3G53240.1 AtRLP45 (Receptor Like Protein 45); protein binding1743e-013
AT1G74180.1 AtRLP14 (Receptor Like Protein 14); protein binding1734e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information