Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN45669

FASTA Sequence
Unigene ID: UN45669Length: 556 SSR 
GCGGGAAAGAGGGAGCTTAGGGGAGAGAGAGAGAGAGAGAAGAAGCCATGGTTAAGTTCCTAAAGCAGAACAAAGCGGTGATCCTC
CTCCAAGGCCGTTACGCCGGCAAGAAAGCTGTGATCATCCGCTCCTTCGACGATGGGAACCGCGAGCGACCATACGGACACTGCCT
CGTCGCGGGACTCAAGAAGTACCCGAGCAAGGTGATCCGCAAGGACTCTGCCAAGAAGACGGCGAAGAAGTCGAGGGTCAAGTGCT
TCATCAAGGTCGTGAACTACCAGCATCTGATGCCTACTCGCTACGCGCTCGACGTGGATCTGAAGGAGGTGGCGACTCTAGAAGCT
CTGTCTTCGAAGGATAAGAAGGTGGCGGCTCTTAAGGAGGCCAAGGCTAAGCTCGAGGAGAGGTTCAAGACTGGGAAGAACAGGTG
GTTCTTCACCAAGCTCAGGTTTTGAGAAGTTTTATCGTTTTTTTGTAATGGAATCTACAGTATGGTTTTTGTAGTTTGTCGGAACA
TGTTTTGGATGGTTTTAAGACAATGGTTTGAAATTTGATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_193236 60S ribosomal protein L27-3 [Arabidopsis thaliana]6664e-068
XP_002870267 60S ribosomal protein L27 [Arabidopsis lyrata subsp. lyrata]6522e-066
NP_188862 60S ribosomal protein L27-2 [Arabidopsis thaliana]6413e-065
AAM63601 ribosomal protein L27, putative [Arabidopsis thaliana]6404e-065
XP_002300063 predicted protein [Populus trichocarpa]6038e-061

Swiss-Prot top hits (Blast detail)Scoree value
P51419 60S ribosomal protein L27-36662e-069
Q8LCL3 60S ribosomal protein L27-26412e-066
Q05462 60S ribosomal protein L275864e-060
Q9SKX8 60S ribosomal protein L27-15856e-060
P41101 60S ribosomal protein L275094e-051

TrEMBL top hits (Blast detail)Scoree value
Q0WRB8 60S ribosomal protein L276663e-068
A9P8D7 60S ribosomal protein L276036e-061
A9PAT1 60S ribosomal protein L276011e-060
A8MS28 Uncharacterized protein At4g15000.25964e-060
B7FH51 60S ribosomal protein L275955e-060

Arabidopsis top hits (Blast detail)Scoree value
AT4G15000.1 60S ribosomal protein L27 (RPL27C)6672e-070
AT3G22230.1 60S ribosomal protein L27 (RPL27B)6421e-067
AT4G15000.2 60S ribosomal protein L27 (RPL27C)5963e-062
AT2G32220.1 60S ribosomal protein L27 (RPL27A)5864e-061

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information