Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN45719

FASTA Sequence
Unigene ID: UN45719Length: 730 SSR 
GGCCATTCATTAATCTGACCGACGACGACGACGAAGTGTTGTCGATTCTCGGCGTCCCGAAACCCTAACTCTTATCGATCGATCGA
TCGATCGAGCTTAGCAGCGAGCGAATAATGGCCAACAGTAATCTGCCCCGAAGAATCATCAAGGAAACTCGACGTCTGCTCAGTGA
GCCTGCTCCTGGGATAAGTGCGTCTCCATCTGAGGAAAACATGCGTTACTTCAACGTTATGGTTCTTGGTCCTTCACAATCACCTT
ATGAAGGAGGTGTTTTCAAGTTGGAGCTCTTTTTGCCTGAAGAATACCCTATGTCAGCCCCCAAGGTTAGGTTTCTCACCAAGATA
TACCATCCTAACATTGATAAGCTTGGGAGAATTTGTCTTGATATTCTGAAAGACAAATGGAGCCCTGCTCTACAAATACGAACAGT
GCTTTTAAGTATCCAAGCTCTGCTGAGTGCACCAAACCCTGATGATCCCTTGTCCGAGAACATCGCTAAGCATTGGAAGAGTAATG
AGGCAGAAGCTGTGGAGACAGCTAAGGAATGGACCCGTCTTTACGCAAGTGGCGAATGATGCAGTGTCTCGCTCATCCAAATAACA
TTACATTTGGTTAAATCTTATCCTTTGCTGGTTCTTCCTCCTCATTACGAAGTTGTAATCTCTCTGAATGATTGTATCATTAACTA
ATACAGTCAGACATTTACTAGTTGCATTCCAAACGAATAGAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564011 ubiquitin-conjugating enzyme E2 36 [Arabidopsis thaliana]7788e-081
BAJ93925 predicted protein [Hordeum vulgare subsp. vulgare]7788e-081
BAJ99711 predicted protein [Hordeum vulgare subsp. vulgare]7761e-080
XP_002887758 ubiquitin-conjugating enzyme 1 [Arabidopsis lyrata subsp. lyrata]7752e-080
ACU15235 unknown [Glycine max]7742e-080

Swiss-Prot top hits (Blast detail)Scoree value
Q9FZ48 Ubiquitin-conjugating enzyme E2 367784e-082
Q94A97 Ubiquitin-conjugating enzyme E2 357722e-081
Q9EQX9 Ubiquitin-conjugating enzyme E2 N6441e-066
Q0P5K3 Ubiquitin-conjugating enzyme E2 N6413e-066
P61088 Ubiquitin-conjugating enzyme E2 N6413e-066

TrEMBL top hits (Blast detail)Scoree value
B7FMQ3 Ubiquitin carrier protein7751e-080
C6SZW2 Ubiquitin carrier protein7751e-080
Q45W77 Ubiquitin carrier protein7751e-080
C6T129 Ubiquitin carrier protein7742e-080
B9SBK8 Ubiquitin carrier protein7723e-080

Arabidopsis top hits (Blast detail)Scoree value
AT1G16890.2 ubiquitin-conjugating enzyme, putative7784e-083
AT1G78870.2 UBC35 (UBIQUITIN-CONJUGATING ENZYME 35); protein binding / ubiquitin-protein ligase7722e-082
AT1G78870.1 UBC35 (UBIQUITIN-CONJUGATING ENZYME 35); protein binding / ubiquitin-protein ligase7605e-081
AT1G16890.1 ubiquitin-conjugating enzyme, putative6191e-064
AT1G78870.3 UBC35 (UBIQUITIN-CONJUGATING ENZYME 35); protein binding / ubiquitin-protein ligase5454e-056

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information