 |
Information for unigene UN45735
| FASTA Sequence |
| Unigene ID: UN45735 | Length: 837 |
SSR | | GGACGCTGTGTACGAAGAGTCGGACTGTTTTCCTCTCGTGATGAAGCTGTGTTCCGGGGGACGTTTGATTGATCAGATGGTTAGGG
AAGGTAGGTACTCTGAGCAGCGAGCGGCTAATATATTCAAGGACCTCATGCTTATCAGTTATTGCCACGAGATGGGAGTTGTACTT
AGAGATCTGTTGGGGAGAATGCTAACAAGAGACGAATCTGCCAGGATCACAGCGGATGAAGTGCTAAGGCATCCATGGATACTCTT
TTACACAGACCGGACACTCAAGACAATGTGTATTAAATCGAAACACAAGGGTCTAATAGCAGGAACTTCTCCTCCCTGCCTTCAGC
TTCGCAATCCGATAAAGAATACTGACGTAAACAGAAGCTAACAGGGAGAAGAAGACAACACATGATGATTCACCACCGACTGATTC
ATTCTCCAACACAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGATGAAAGCGGTGTGGTCGATGTGCTTGTGGTTGCAATCT
CCAACGTGAGGATCTCAGAACCGAAGAGAAGCAGACTCTGTAGTCCCACCAACACCCCCATTGAGCAGCAACACTCTTCTAACTTG
ACCACGACTAATACACTCTGTCGAGCCTTCTGACGCTAAACCAGCTTCACTCACTCGTCCAAGTCTCTAAGTCACACGGGTTTGTC
CCTGATATGATGATCTTGGTTACTGTCATAGATCATCATAATAGCTCTCTCTAATTAGTTGGATTTGATCTGATTCTGGTTTTCTC
CTTCTACATTTCTGACTTTGCTGTACATATTATATCTTCATGCAAATAGAATACGCTACAAGT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002892701 hypothetical protein ARALYDRAFT_471419 [Arabidopsis lyrata subsp. lyrata] | 316 | 4e-027 |
| AAF88093 T12C24.22 [Arabidopsis thaliana] | 303 | 1e-025 |
| NP_172728 serine/threonine-protein kinase PEPKR2 [Arabidopsis thaliana] | 303 | 1e-025 |
| XP_002307792 predicted protein [Populus trichocarpa] | 253 | 8e-020 |
| XP_002514000 calcium-dependent protein kinase, putative [Ricinus communis] | 237 | 6e-018 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8W490 Serine/threonine-protein kinase PEPKR2 | 303 | 6e-027 |
| Q8RWL2 Calcium-dependent protein kinase 29 | 162 | 1e-010 |
| Q9SZM3 Calcium-dependent protein kinase 26 | 133 | 3e-007 |
| Q38870 Calcium-dependent protein kinase 2 | 130 | 7e-007 |
| A5A7I7 Calcium-dependent protein kinase 4 | 129 | 9e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9H5H9 Predicted protein | 253 | 6e-020 |
| B9RJT1 Calcium-dependent protein kinase, putative | 237 | 4e-018 |
| B9S9E7 Calcium-dependent protein kinase, putative | 211 | 4e-015 |
| A2Z261 Putative uncharacterized protein | 206 | 2e-014 |
| A3BZQ4 Putative uncharacterized protein | 206 | 2e-014 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G12680.1 PEPKR2 (Phosphoenolpyruvate carboxylase-related kinase 2); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | 304 | 4e-028 |
| AT1G76040.2 CPK29; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | 162 | 1e-011 |
| AT1G12580.1 PEPKR1 (Phosphoenolpyruvate carboxylase-related kinase 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | 160 | 2e-011 |
| AT3G10660.1 CPK2 (CALMODULIN-DOMAIN PROTEIN KINASE CDPK ISOFORM 2); calmodulin-dependent protein kinase/ kinase/ protein serine/threonine kinase | 130 | 6e-008 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
