 |
Information for unigene UN45754
| FASTA Sequence |
| Unigene ID: UN45754 | Length: 873 |
SSR | | GGAGCGTTTCAGTGAGTCATAGACACTAAACTAAACCACCACTCTCTCTTCCTTATTCCTCTTCCAAGAACCATGTCTAATAACAC
CAACGGAGTTATGATCTCAAACAGAGATATACTCGAACGTCAGAGACAACAACAACAGCAACAGCAACCGTCAGAGGGAGCTCTCG
TTGTGAAGAAACCTCTAGCGAAAGATCGACACACCAAAGTCGACGGAAGAGGGAGGAGGATACGTATGCCAATCATATGCGCAGCT
CGTGTTTTCCATCTAACGCGAGAGCTCGGCCACAAATCCGACGGCCAGACCATCGAATGGCTCCTCCGTCAAGCTGAGCCTTCCAT
CATAGCCGCGACAGGAACCGGCACTACTCCGGCAAGCTTCTCCACCACCTCAACAAGTGATGTTCTTGCAACAACAACAACAACAA
CAAGAAGCTGCACTTTTTGTTCACCAGCAGCGACAGCAACAAGGTGCAATGGGTGAAGCTTCGGCACTAGAGTTGGTAGTCATCTT
AACTTGCTAGCTTCTTTGTCTGGTGGAGCTCCCGGGTCGGGTCGGAGAGAGGAAGACACACGTTGATGATGAAGTTGAGCTCCTTT
TTACTTTGGTACATATATATTTCTGTCTCTATATATGTTTGTGTTTTAGTTTTTAGATTGATCGATTGGTTCCAGGAGTGATGTAA
GAGTATCTTTCGTGTTGAAGTTAAAACTAGGGTTAGGGTTTAAGAATCTTGTCTTAAAGATTTGTTTCATGAAGTTTTTGTGTTTG
TGGGAGATCAAGATTTACTACTGTTTATTGTTGTTGCTAATTGTGTAATGTGTTGCAATGAATGTGGTTAGAAAATGCGTAAGCTG
CCACGTTTGTTTT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABB97033 unknown [Brassica rapa] | 474 | 2e-045 |
| CBI29001 unnamed protein product [Vitis vinifera] | 458 | 2e-043 |
| XP_002268058 PREDICTED: hypothetical protein [Vitis vinifera] | 401 | 6e-037 |
| NP_197719 transcription factor TCP7 [Arabidopsis thaliana] | 389 | 2e-035 |
| BAC43274 unknown protein [Arabidopsis thaliana] | 388 | 2e-035 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FMX2 Transcription factor TCP7 | 389 | 7e-037 |
| Q9FTA2 Transcription factor TCP21 | 362 | 9e-034 |
| Q93Z00 Transcription factor TCP14 | 320 | 7e-029 |
| Q9C7G4 Transcription factor TCP22 | 319 | 9e-029 |
| Q9C518 Transcription factor TCP8 | 318 | 1e-028 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2V608 Putative uncharacterized protein | 474 | 1e-045 |
| B9H5Q1 Predicted protein | 380 | 1e-034 |
| B9HGF5 Predicted protein | 380 | 1e-034 |
| C5XWP0 Putative uncharacterized protein Sb04g038140 | 377 | 3e-034 |
| B8AF71 Putative uncharacterized protein | 372 | 1e-033 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G23280.1 TCP family transcription factor, putative | 389 | 6e-038 |
| AT5G08330.1 TCP family transcription factor, putative | 362 | 8e-035 |
| AT3G47620.1 AtTCP14 (TEOSINTE BRANCHED1, CYCLOIDEA and PCF (TCP) 14); transcription factor | 320 | 6e-030 |
| AT1G72010.1 TCP family transcription factor, putative | 319 | 8e-030 |
| AT1G58100.1 TCP family transcription factor, putative | 318 | 1e-029 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
