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Information for unigene UN45760
| FASTA Sequence |
| Unigene ID: UN45760 | Length: 617 |
SSR | | GAGGTAATAAATATTTTAGAGTTACTCTATTATTCATGAAAATTTATATGTCTTCGGATGTACACATGAAAATAGTTTTTTGGGTG
TTTACTTAAAATTACAAGAAACCAGAAGATCGTTCATGATTCATGGAAAAGGAGAGAGAGAGATGAACACTGATGAAGGACATATC
TAGAGTTCATGTTCAGAGTGAAAGACCAGACTCTTCATCCTCGTCGAGAGATGAAGTGTAGGTGAAGTAGAAAGTCCAGATCAAAC
CAAACACTCCTAAAAGAATCCAACCCAAGAGGTTGTTGCTCAGCCCAAAGGGCAAGCCGGTTCCCTCCGTTGACATCCTGTCATCC
ACCAAAGCCATAGCCGGGCTGCTCATCACAGCTGTCAAAGCTGCCGTAGACGTTTCCTTGCTTGGTCTCCATCGAGCACTTCACTC
CTCCCTTCCTCTTACTCATTGGAGGCAAACCAAGAACAGGAGGAGACGGCGACGGTGGGCTTGAGAAGGAGAGCAGGACGAGCGAC
GGAGACGGTGGAAGCGGAGGCAGTGAAGCTAGCCATTTTTCTCTATCTCTCTTTTTTTGTTTACACAACTAGACAACCTTTAATTT
TTTTGCTTGTGTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABL97943 component of 6.1 kDa polypeptide of photosystem II reaction center [Brassica rapa] | 345 | 9e-031 |
| CAA62296 component of 6.1 kDa polypeptide of photosystem II reaction center [Arabidopsis thaliana] | 324 | 3e-028 |
| NP_180615 photosystem II reaction center W protein [Arabidopsis thaliana] | 324 | 3e-028 |
| XP_002881119 hypothetical protein ARALYDRAFT_902045 [Arabidopsis lyrata subsp. lyrata] | 324 | 3e-028 |
| ACU13646 unknown [Glycine max] | 292 | 1e-024 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q39194 Photosystem II reaction center W protein, chloroplastic | 324 | 1e-029 |
| Q41387 Photosystem II reaction center W protein, chloroplastic | 284 | 6e-025 |
| Q5ZBY9 Photosystem II reaction center W protein, chloroplastic | 247 | 1e-020 |
| Q9SPI9 Photosystem II reaction center W protein, chloroplastic | 163 | 6e-011 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A1YMY4 Component of 6.1 kDa polypeptide of photosystem II reaction center | 345 | 7e-031 |
| Q41908 Photosystem II 7kD protein | 330 | 4e-029 |
| C6SWM3 Putative uncharacterized protein | 292 | 9e-025 |
| C6SYI0 Putative uncharacterized protein | 291 | 1e-024 |
| Q8W536 Photosystem II reaction center (Fragment) | 290 | 2e-024 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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