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Information for unigene UN45781

FASTA Sequence
Unigene ID: UN45781Length: 697 SSR 
AAAGTCGGAAAAGATCCAATTCGAAATCTCTCTCTCTTCTCTCTCTCTCTCCCGTGAGAGAACAGACGACATATTTTGTTCTTTCC
AGATCTCATCATCGTTTCCGAAACTCACAAACCGAGAGAGAGAAGGAGAAGGAAGGAAGGAATCATGATAACGATCCCATACCTAA
CGGCGGTATCAACATACTTCAGCTACGGATTGCTATTCGCCTTCGGGCAGCTTCGGGATTACACACGCCTGATCTTCGATTGGTGC
TCAACCAATAATCTCCACGGTTACGCCCCCATCTGCTTGGCTCACGAGGATTTCTACATCCGTCGTTTGTATCACCGCATTCAGGA
TTGTTTTAATCGACCGATATCAAGTGTTCCTGATTCTTGGGTTGATGTTATCGAGAGGTACTCTAATGACAACAACAAGACCCTCA
AGCGAACAGCAAAGAGCACAAGGTGCCTTAATCTGGGATCTTACAACTATCTTGGTTTTGGTTCTTTCGATGAGTATTGCACCCCT
CGTGTTATTGAGTCTTTGAAGAAGTTTTCCCCAAGTACATGTAGCTCTCGCGTTGACGCAGGAACCACATCTGTGCACGCAGAGCT
TGAAGAATGTGTTGCCAAGTATGTGGGAAAACCTGCTGCTATTGTCACTGGCATGGGCTTCGCTACTAACTCTGTTATCATTCCTG
TCTTGATTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABW97708 serine palmitoyltransferase long chain base subunit [Brassica rapa subsp. chinensis]9481e-100
NP_190447 serine palmitoyltransferase 1 [Arabidopsis thaliana]8746e-092
XP_002875925 hypothetical protein ARALYDRAFT_485232 [Arabidopsis lyrata subsp. lyrata]8683e-091
NP_197756 serine palmitoyltransferase [Arabidopsis thaliana]8478e-089
XP_002872066 LCB2 subunit protein [Arabidopsis lyrata subsp. lyrata]8478e-089

Swiss-Prot top hits (Blast detail)Scoree value
Q09925 Serine palmitoyltransferase 23771e-035
O54694 Serine palmitoyltransferase 23456e-032
P97363 Serine palmitoyltransferase 23448e-032
O15270 Serine palmitoyltransferase 23412e-031
Q54EX5 Serine palmitoyltransferase 23223e-029

TrEMBL top hits (Blast detail)Scoree value
B2XR72 Serine palmitoyltransferase long chain base subunit9481e-100
Q9M304 At3g487808744e-092
Q9LSZ9 Putative serine palmitoyltransferase8475e-089
Q9LRB4 Serine palmitoyltransferase8422e-088
B3Y000 Serine palmitoyltransferase7893e-082

Arabidopsis top hits (Blast detail)Scoree value
AT3G48780.1 SPT1 (SERINE PALMITOYLTRANSFERASE 1); serine C-palmitoyltransferase8743e-094
AT5G23670.1 LCB2; protein binding / serine C-palmitoyltransferase8473e-091
AT5G23670.2 LCB2; protein binding / serine C-palmitoyltransferase8473e-091
AT3G48790.1 serine C-palmitoyltransferase, putative1629e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  100%

Unigene MembersMember information