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Information for unigene UN45845

FASTA Sequence
Unigene ID: UN45845Length: 784 SSR 
AGTAAATTAAATTATTCATACCAATTCAGAAACGAAAAGCAATTACATTCTCCCAACATTTGCCCAACACCCTCTCTCTCTCTCTC
CCTTCAATCACAAACCTTTGTACCAGCAAAATCATATAATGCATACTCAGACTATAATACTAGAACAAACAAAACGGACCAACTTG
CCTGTGGAGGAATCTCCGCTGAAAGGCTCTGCAATGCAATGGTGGGAGCTTGAGGGTGTCTTTTTTTTTGTTTCTTTCATTTTTTT
GTTCATAAGTTGAATTGTAGAAAACAAATACAAAAAGAAAAGGAAAAAAAGGAGCTATGATTCATCCTATTTTCCGCTTCTTGGCA
GTGTTCAAGCCTGTCGTCTTGCAAATTGGGCAGAGATTCTTCTGTTTCAGCCATTCTTTTATGCATTGGCTATGGAATTCATGCCC
ACATTCTAAAGTCCCCATGTCTTCTCCCTCAGTGTATTCCTCCTGACAAATACAGCATGGCTCTGCATCTTGTGGAGATTTTGTGC
TGCTTTTGTATTTACTCTGCTTCAACCGGTTTGATATGGTTTCTTCGTTTACACCCGTACAAACATCTCCAATCCGCTCTTCTAGT
GCCAGCAGTTCCTCACGGACATGTTGCAGCAGAGACGCTTTCACAACGTTTCCACCGGACACAAACGAACGAATCGCAGCTTGCAT
CTTTTTACCTGAGATTTGATTAACCAAGAAGAAACGGATCGGAGTGGGGAAGCTGAAGAACCCTAGATTATGAGCAAGAGACAGAG
GACACGAGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_199108 RING/U-box domain-containing protein [Arabidopsis thaliana]5162e-050
XP_002863715 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]5144e-050
AAC69857 RING-H2 finger protein RHG1a [Arabidopsis thaliana]5127e-050
XP_002891317 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]4671e-044
NP_175132 RING/U-box domain-containing protein [Arabidopsis thaliana]4482e-042

Swiss-Prot top hits (Blast detail)Scoree value
Q93Z92 E3 ubiquitin-protein ligase At4g116801485e-009
Q9WTV7 E3 ubiquitin-protein ligase RLIM1485e-009
Q9NVW2 E3 ubiquitin-protein ligase RLIM1469e-009
Q68DV7 RING finger protein 431469e-009
Q7T037 E3 ubiquitin-protein ligase RNF12-B1432e-008

TrEMBL top hits (Blast detail)Scoree value
Q9FMM4 AT5G42940 protein5162e-050
Q9ZT41 RING-H2 finger protein RHG1a (Fragment)5125e-050
Q9MAJ1 F27F5.264481e-042
Q00M82 Zinc finger protein 23593e-032
B9GNU5 Predicted protein3583e-032

Arabidopsis top hits (Blast detail)Scoree value
AT5G42940.1 zinc finger (C3HC4-type RING finger) family protein5178e-053
AT1G45180.1 zinc finger (C3HC4-type RING finger) family protein4488e-045
AT4G34040.1 zinc finger (C3HC4-type RING finger) family protein3341e-031
AT2G15530.1 zinc finger (C3HC4-type RING finger) family protein3242e-030
AT2G15530.2 zinc finger (C3HC4-type RING finger) family protein3242e-030

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

Unigene MembersMember information