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Information for unigene UN45856

FASTA Sequence
Unigene ID: UN45856Length: 555 SSR 
GAAAAGAATTATCTCTGTTATTATACTTTCTCTCTGCCCAAACTTCTGGTAAATAACTAAAATCAAAACACTAACAAATAATTTAG
AGAAAAAAAGAGAGGTAACTTACAGTGAGAGTTAATGATCTGAAGAAAGTAGCAACAGAGTTACATTGAGTAAAGTCTGATTCAGT
TATAGACACTAATCTTCTTCTTCTTCTCCTTCCTCCACCTTCTCTGATCATGACTTCTTCTTCTTCGATCATCTTGGATGGTTTTG
GAATTGCTGTATACCCATGTCTGTACACCTGGAGACAGATTTCACAAGTGGTGTTTCCCTTTTCATTACACCAACGTTGTATGCAA
TCTCTGTGTGCGAACTTAACGGTTCCAGAGCAAGCACAAGGAACTTCGAAGAAACTTTCTGCTTCTTCTTCATGGCAGATTCTGCA
ACGCGATATTCTCTGTTTCGAACTCTTCGTCTCATCAATGTTTATAACCACTTCTCCCATCTCTCTCTCTCTCTCTCTCTCTCTCT
CTGGATCCTTCTCTGTTTTTTTTGAAATTTCTTTTTTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_567222 protein pitchoun 1 [Arabidopsis thaliana]4863e-047
XP_002872858 hypothetical protein ARALYDRAFT_490373 [Arabidopsis lyrata subsp. lyrata]4684e-045
AAG10626 Unknown protein [Arabidopsis thaliana]4173e-039
NP_171761 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]4083e-038
XP_002892113 predicted protein [Arabidopsis lyrata subsp. lyrata]3941e-036

Swiss-Prot top hits (Blast detail)Scoree value
Q0P496 E3 ubiquitin-protein ligase MARCH41341e-007
Q0IH10 E3 ubiquitin-protein ligase MARCH31331e-007
Q86YJ5 E3 ubiquitin-protein ligase MARCH91331e-007
Q3TZ87 E3 ubiquitin-protein ligase MARCH91331e-007
Q32L65 E3 ubiquitin-protein ligase MARCH21322e-007

TrEMBL top hits (Blast detail)Scoree value
Q9XF50 At4g020754862e-047
Q9FWY0 T14P4.10 protein4172e-039
B7FL62 Putative uncharacterized protein3322e-029
C6T3F3 Putative uncharacterized protein3303e-029
C6TCD6 Putative uncharacterized protein3251e-028

Arabidopsis top hits (Blast detail)Scoree value
AT4G02075.1 PIT1 (pitchoun 1); protein binding / zinc ion binding4862e-049
AT1G02610.1 zinc finger (C3HC4-type RING finger) family protein2934e-027
AT2G01275.1 zinc finger (C3HC4-type RING finger) family protein2495e-022
AT2G01275.2 zinc finger (C3HC4-type RING finger) family protein2495e-022
AT3G47550.3 zinc finger (C3HC4-type RING finger) family protein2487e-022

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  100%

Unigene MembersMember information