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Information for unigene UN45868

FASTA Sequence
Unigene ID: UN45868Length: 762 SSR 
GGAAAGGAGCAAAACCTTTTAACAGCCGTACGATCTTAACTCGTTTGACACATCTCACTGACTTCTTCAGTCATCAGCTTCCTCTC
TCTCTCTTCAGATCTCTGCATCTCCTCCTCCTCCTCCTCCTCCTCGGGTTTCAATGTCGCTCCATCATCATTATCTTCTTCTTCTT
CTTCTGCTACTAGTATCCCTGACCCCTTCTCTGCTCCAAGCTTCGGTGCATGAGTACCGCAGCGAGAGATTCATGTCCAAAGGCAA
CGCCTTTGTCTTCCACGGCGGCAGCGAAGGCATCTACTCCTCTTCTCCCTCCGACTCCGATTCCCTCTCCTCCTTTATCCGTTTCG
AGAAGATCACATTCCGGAGACCTGAGGAAGTTTCCAACGCCTCTTCATTACCTATCCACGCCGTCGTTTTCGAGGTGGAAGACAGG
GAGAACATCGGAGGATCAGCTTACGGTGGGCAGAGAGCTGTCTGCTGCACATCTGACTTGGCTAAACTCGGTGTCTGCTCCCATGG
AGAGATCATTCACCACCCTTCCCTTAAAGACTCCTCCTGGCCTCAAGTCTTTGGTGTTTCCTTTGTCGAGAGCGAGTTGTCTGCTA
CTCTGCCGACGAGGTCGGTTCAGATCCCTAGGACAGGAATGTACAACCTCTACTTCATCCACTGCGACCCTGGTCTCAAGGATTTG
AGTGTTGAAGGTAAAACCTTCTGGAAAACCCTGGAGGGTACTTACCAGGTAGAATGGCTCCGTTGATGTACTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002888879 hypothetical protein ARALYDRAFT_895100 [Arabidopsis lyrata subsp. lyrata]7771e-080
NP_177392 lung seven transmembrane receptor-like protein [Arabidopsis thaliana]7644e-079
BAD94405 hypothetical protein [Arabidopsis thaliana]7644e-079
XP_002271404 PREDICTED: hypothetical protein [Vitis vinifera]6221e-062
CAN62240 hypothetical protein VITISV_033728 [Vitis vinifera]6211e-062

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q56YA4 Putative uncharacterized protein At1g724807643e-079
Q9C9E6 Putative uncharacterized protein T10D10.57643e-079
A5CA53 Putative uncharacterized protein6211e-062
B9GVZ0 Predicted protein6074e-061
B9T3A9 Ptm1, putative5322e-052

Arabidopsis top hits (Blast detail)Scoree value
AT1G72480.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01070.1); Has 422 Blast hits to 420 proteins in 121 species: Archae - 0; Bacteria - 0; Metazoa - 208; Fungi - 101; Plants - 83; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).7642e-081
AT2G01070.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72480.1); Has 500 Blast hits to 499 proteins in 125 species: Archae - 0; Bacteria - 0; Metazoa - 271; Fungi - 99; Plants - 97; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).4003e-039
AT2G01070.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72480.1); Has 487 Blast hits to 486 proteins in 125 species: Archae - 0; Bacteria - 0; Metazoa - 264; Fungi - 101; Plants - 89; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).4003e-039
AT1G61670.1 FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system, integral to membrane; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10980.1); Has 473 Blast hits to 471 proteins in 125 species: Archae - 0; Bacteria - 2; Metazoa - 242; Fungi - 99; Plants - 92; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink).2669e-024

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  50%
 
101  50%

Unigene MembersMember information