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Information for unigene UN45881
| FASTA Sequence |
| Unigene ID: UN45881 | Length: 690 |
SSR | | TTTTTAGTCAAAAATATCTATATCACCTTAAAATATATCAAAACATTAACATATTTAACTAATTTCGGATATCTTCGGATCCTAGT
TCGGATTTCGGATCGGTTCGGGTTATAACCAAACACCAAAGTACTAAGCTCATAAGTCCCATTCGGATATTTTTGTATAACAGTTC
GGTTTCGGTTTCGGTTTTTTCGGTCCGGGTTTAGGTAGGTACTTCGGGTTCGGGTAAAAACGCCCAGGCCTACTCGGGAGCATCGT
CACCCTTGGCAGCTACACATCTGTGATATTCAATGTAACGTGTGAAACAATGCCTGGTTTGGTTTGTTGTCGGGAAACGGAAATCA
GCAGGAGCTGTCTCAAGCTTGATCTCATCAGGAGTCTCCTCAGCAACTTCTTCACTAGTGTTTTCTTCTTCAGTAGCCGCAGCAGG
AGCCTCTACGGAAGTCACTTCCGTGGAAGCGGGAGACTCGGACTTGTCTTCAACAGCTTCCTCAGGAGGAGAATCTTCCTTGGCTT
CAACCTCTTCAGCTTGAACTTCAACAGGCTTCACTTCTTTCTCCAACTGATATTGCTCGGAGAGCGACGGAGTTTGAGCAGAAACC
GATTCCGCCATTTGAAGTGTGTGAACTCAGGAGAGCGACAGAGAATCTTTTGATGGTTCGGTAGGTTTAAGCTCTCTCTCTCTCTC
CC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_173661 cytochrome C oxidase 6B [Arabidopsis thaliana] | 379 | 1e-034 |
| AAM63485 cytochrome c oxidase subunit, putative [Arabidopsis thaliana] | 376 | 3e-034 |
| XP_002890515 hypothetical protein ARALYDRAFT_889753 [Arabidopsis lyrata subsp. lyrata] | 360 | 2e-032 |
| AAM92706 putative cytochrome c oxidase subunit [Triticum aestivum] | 317 | 2e-027 |
| ABK95863 unknown [Populus trichocarpa] | 312 | 8e-027 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O94581 Cytochrome c oxidase subunit 6B | 144 | 1e-008 |
| P00429 Cytochrome c oxidase subunit 6B1 | 119 | 9e-006 |
| Q7YRK6 Cytochrome c oxidase subunit 6B1 | 119 | 9e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9S7L9 Putative cytochrome c oxidase subunit | 379 | 1e-034 |
| Q8LCP1 Cytochrome c oxidase subunit, putative | 376 | 2e-034 |
| Q8L808 Putative cytochrome c oxidase subunit | 317 | 1e-027 |
| A9PHL0 Putative uncharacterized protein | 312 | 6e-027 |
| B9H706 Predicted protein | 300 | 1e-025 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G22450.1 COX6B (CYTOCHROME C OXIDASE 6B); cytochrome-c oxidase | 447 | 8e-045 |
| AT5G57815.1 cytochrome c oxidase subunit 6b, putative | 196 | 1e-015 |
| AT4G28060.1 cytochrome c oxidase subunit 6b, putative | 178 | 1e-013 |
| AT1G32710.1 cytochrome c oxidase subunit VIb family | 118 | 1e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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